RNA–Protein interactions for RNA: ENST00000583741.1

SRSF1-206, Transcript of serine and arginine rich splicing factor 1, humanhuman

TSL 5

Gene SRSF1, Length 1,465 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1-206ENST00000583741 ZNF284Q2VY69 593 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 CDCP2Q5VXM1 449 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 C14orf80Q86SX3 495 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 SLC22A18ASQ8N1D0 253 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 WDTC1Q8N5D0 677 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 SLC30A5Q8TAD4 765 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 ARRDC3Q96B67 414 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 NAF1Q96HR8 494 aaKnown RBP20.92■□□□□ 0.94
SRSF1-206ENST00000583741 NOX5Q96PH1 765 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 HS3ST2Q9Y278 367 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 REXO2Q9Y3B8 237 aaKnown RBP20.92■□□□□ 0.94
SRSF1-206ENST00000583741 TRPM6Q9BX84 2022 aa20.92■□□□□ 0.94
SRSF1-206ENST00000583741 COL27A1Q8IZC6 1860 aaPredicted RBP20.91■□□□□ 0.94
SRSF1-206ENST00000583741 K7ERQ8 282 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 SNAP91O60641 907 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 MPOP05164 745 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 CKMT1AP12532 417 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 ALKBH5Q6P6C2 394 aaKnown RBP20.91■□□□□ 0.94
SRSF1-206ENST00000583741 C17orf53Q8N3J3 647 aaPredicted RBP20.91■□□□□ 0.94
SRSF1-206ENST00000583741 OR2A12Q8NGT7 310 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 PSMB7Q99436 277 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 LGMNQ99538 433 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 CALN1Q9BXU9 219 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 PDCL3Q9H2J4 239 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 LUC7LQ9NQ29 371 aaKnown RBP20.91■□□□□ 0.94
SRSF1-206ENST00000583741 TBC1D30Q9Y2I9 924 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 COL6A6A6NMZ7 2263 aa20.91■□□□□ 0.94
SRSF1-206ENST00000583741 LY6G6EA0A0G2JKS1 128 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 ESPNB1AK53 854 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 KPNA3O00505 521 aaPredicted RBP20.9■□□□□ 0.94
SRSF1-206ENST00000583741 CCP110O43303 1012 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 OPA1O60313 960 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 HSF2BPO75031 334 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 PAGE1O75459 146 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 PIAS2O75928 621 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 CNTN5O94779 1100 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 GLI1P08151 1106 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 CHRNA3P32297 505 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 CLDN2P57739 230 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 NME3Q13232 169 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 C5orf22Q49AR2 442 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 CCDC122Q5T0U0 273 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 OTUD1Q5VV17 481 aaPredicted RBP20.9■□□□□ 0.94
SRSF1-206ENST00000583741 GCNT7Q6ZNI0 430 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 HORMAD1Q86X24 394 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 HIC2Q96JB3 615 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 MUC3BQ9H195 1237 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 ASNSD1Q9NWL6 643 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 VPS51Q9UID3 782 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 NENFQ9UMX5 172 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 ZFR2Q9UPR6 939 aaKnown RBP20.9■□□□□ 0.94
SRSF1-206ENST00000583741 U3KQA8 63 aa20.9■□□□□ 0.94
SRSF1-206ENST00000583741 CLDN11O75508 207 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 HNRNPA2B1P22626 353 aaKnown RBP20.89■□□□□ 0.94
SRSF1-206ENST00000583741 RRM1P23921 792 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 SEL1L3Q68CR1 1132 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 NEK5Q6P3R8 708 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 TRIM72Q6ZMU5 477 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 FAM183BPQ6ZVS7 135 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 ZNF605Q86T29 641 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 KIAA1328Q86T90 577 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 PASD1Q8IV76 773 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 ZNF248Q8NDW4 579 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 PPP1R13BQ96KQ4 1090 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 APOLD1Q96LR9 279 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 PCDHB18PQ96TA0 734 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 ANLNQ9NQW6 1124 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 KCND1Q9NSA2 647 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 TRMT1Q9NXH9 659 aaKnown RBP20.89■□□□□ 0.94
SRSF1-206ENST00000583741 PCDHA13Q9Y5I0 950 aa20.89■□□□□ 0.94
SRSF1-206ENST00000583741 USP27XA6NNY8 438 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 I6L893 689 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-206ENST00000583741 SMAD6O43541 496 aaKnown RBP20.88■□□□□ 0.93
SRSF1-206ENST00000583741 AKT2P31751 481 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 MAGEA1P43355 309 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 VAV2P52735 878 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 CDH4P55283 916 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 PCBP4P57723 403 aaKnown RBP20.88■□□□□ 0.93
SRSF1-206ENST00000583741 GABREP78334 506 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 ALFQ53S48 1182 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 ZNF542PQ5EBM4 170 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 EFHC1Q5JVL4 640 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 OLFML1Q6UWY5 402 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 ABI3BPQ7Z7G0 1075 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 ATP11CQ8NB49 1132 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 CHST14Q8NCH0 376 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 TMIEQ8NEW7 156 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 ZNF578Q96N58 590 aaPredicted RBP20.88■□□□□ 0.93
SRSF1-206ENST00000583741 SIK2Q9H0K1 926 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 CPNE5Q9HCH3 593 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 PCDHGC3Q9UN70 934 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 DOCK4Q8N1I0 1966 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 USP12O75317 370 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 GZMAP12544 262 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 CFHR1Q03591 330 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 TMEM259Q4ZIN3 620 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 LINGO4Q6UY18 593 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 TXLNBQ8N3L3 684 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 GRIN3AQ8TCU5 1115 aa20.88■□□□□ 0.93
SRSF1-206ENST00000583741 DEPDC7Q96QD5 511 aa20.88■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms