RNA–Protein interactions for RNA: ENST00000577572.5

SS18-206, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 4

Gene SS18, Length 510 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-206ENST00000577572 ATP11CQ8NB49 1132 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 TSEN2Q8NCE0 465 aaKnown RBP15.49■□□□□ 0.07
SS18-206ENST00000577572 KCNV2Q8TDN2 545 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 UCMAQ8WVF2 138 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 SPOCK2Q92563 424 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 SERPINB12Q96P63 405 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 SEMA3CQ99985 751 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 MLPHQ9BV36 600 aaPredicted RBP15.49■□□□□ 0.07
SS18-206ENST00000577572 KCNK12Q9HB15 430 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 ELOVL2Q9NXB9 296 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 PRKAG3Q9UGI9 489 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 STARD13Q9Y3M8 1113 aa15.49■□□□□ 0.07
SS18-206ENST00000577572 A0A1W2PQ67 120 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 TCRBV7S3A2A0A539 114 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 OTOL1A6NHN0 477 aaPredicted RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 SPAG6O75602 509 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 IGSF6O95976 241 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 SRCP12931 536 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 ADRA1AP35348 466 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 OPRD1P41143 372 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 RPL26P61254 145 aaKnown RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 SNRPD1P62314 119 aaKnown RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 SKOR1P84550 965 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 DHX9Q08211 1270 aaKnown RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 GEN1Q17RS7 908 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 AAK1Q2M2I8 961 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 FAXCQ5TGI0 409 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 KDELC1Q6UW63 502 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 RANBP10Q6VN20 620 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 PRPF39Q86UA1 669 aaKnown RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 RALGPS2Q86X27 583 aaPredicted RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 CNPY4Q8N129 248 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 PHTF2Q8N3S3 785 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 SLC44A3Q8N4M1 653 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 NAT16Q8N8M0 369 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 TERB1Q8NA31 727 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 OXNAD1Q96HP4 312 aaPredicted RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 FEM1CQ96JP0 617 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 GDAP1L1Q96MZ0 367 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 TUBGCP5Q96RT8 1024 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 GORASP1Q9BQQ3 440 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 RPP25Q9BUL9 199 aaKnown RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 VIPAS39Q9H9C1 493 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 SCUBE2Q9NQ36 999 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 CASS4Q9NQ75 786 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 LHX3Q9UBR4 397 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 RPL26L1Q9UNX3 145 aaKnown RBP15.48■□□□□ 0.07
SS18-206ENST00000577572 PLA2G4CQ9UP65 541 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 ERVW-1Q9UQF0 538 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 TTLL3Q9Y4R7 772 aa15.48■□□□□ 0.07
SS18-206ENST00000577572 LOC285095A0A1B0GVY8 99 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 SDR42E2A6NKP2 422 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 SOCS5O75159 536 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 APODP05090 189 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 MMP2P08253 660 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 GSTA2P09210 222 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 FAM153BP0C7A2 387 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 HLA-DPA1P20036 260 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 TNFRSF4P43489 277 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 PMS2P54278 862 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 WNT3AP56704 352 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 ST8SIA6P61647 398 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 RAD51Q06609 339 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 NIPAL4Q0D2K0 466 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 CDH17Q12864 832 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 LAMB3Q13751 1172 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 FAM153CQ494X1 144 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 CFAP58Q5T655 872 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 NCEH1Q6PIU2 408 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 LINGO4Q6UY18 593 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 HDXQ7Z353 690 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 CAND1Q86VP6 1230 aaKnown RBP15.47■□□□□ 0.07
SS18-206ENST00000577572 OR2AP1Q8NGE2 309 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 PTCD2Q8WV60 388 aaKnown RBP15.47■□□□□ 0.07
SS18-206ENST00000577572 LRIG1Q96JA1 1093 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 SRPK1Q96SB4 655 aaKnown RBP15.47■□□□□ 0.07
SS18-206ENST00000577572 TBL1YQ9BQ87 522 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 FSD1LQ9BXM9 530 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 CPEB1Q9BZB8 566 aaKnown RBP15.47■□□□□ 0.07
SS18-206ENST00000577572 PABPC3Q9H361 631 aaKnown RBP15.47■□□□□ 0.07
SS18-206ENST00000577572 SLC2A4RGQ9NR83 387 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 GTSE1Q9NYZ3 720 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 BFARQ9NZS9 450 aa15.47■□□□□ 0.07
SS18-206ENST00000577572 BRWD1Q9NSI6 2320 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 LOC730098B7Z3J9 87 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 WASH3PC4AMC7 463 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 MUSKO15146 869 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 MT-CO1P00395 513 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 ALADP13716 330 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 CD86P42081 329 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 MAGEA4P43358 317 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 SCNN1BP51168 640 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 DSC2Q02487 901 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 CCDC38Q502W7 563 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 TMEM215Q68D42 235 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 C22orf39Q6P5X5 142 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 ZNF534Q76KX8 674 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 SRLQ86TD4 932 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 C12orf40Q86WS4 652 aa15.46■□□□□ 0.07
SS18-206ENST00000577572 GSPT2Q8IYD1 628 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms