RNA–Protein interactions for RNA: ENST00000560897.1

HERC1-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 5

Gene HERC1, Length 539 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-210ENST00000560897 KDELC2Q7Z4H8 507 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 SPRED1Q7Z699 444 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 HID1Q8IV36 788 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 NRSN1Q8IZ57 195 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 NLGN4XQ8N0W4 816 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 SH2D3CQ8N5H7 860 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 ATP11CQ8NB49 1132 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 NLGN4YQ8NFZ3 816 aaPredicted RBP9.73□□□□□ -0.85
HERC1-210ENST00000560897 GOLGA5Q8TBA6 731 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 PLEKHO2Q8TD55 490 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 TATDN2Q93075 761 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 DDA1Q9BW61 102 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 C1QTNF7Q9BXJ2 289 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 EDEM3Q9BZQ6 932 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 ZMYND15Q9H091 742 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 SEMA6CQ9H3T2 930 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 IL36AQ9UHA7 158 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 DAAM1Q9Y4D1 1078 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 B3GALT1Q9Y5Z6 326 aa9.73□□□□□ -0.85
HERC1-210ENST00000560897 ADGRG4Q8IZF6 3080 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 TCAF2A6NFQ2 919 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 RASGRP1O95267 797 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 CPNE6O95741 557 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 ADRB3P13945 408 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 TACR2P21452 398 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 CSTF2P33240 577 aaKnown RBP eCLIP9.72□□□□□ -0.85
HERC1-210ENST00000560897 MAN1A1P33908 653 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 PLK1P53350 603 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 DAOAP59103 153 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 RAB15P59190 212 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 YPEL5P62699 121 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 MRPL49Q13405 166 aaKnown RBP9.72□□□□□ -0.85
HERC1-210ENST00000560897 ZXDCQ2QGD7 858 aaPredicted RBP9.72□□□□□ -0.85
HERC1-210ENST00000560897 AMZ1Q400G9 498 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 ARSIQ5FYB1 569 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 RABGAP1LQ5R372 815 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 CERCAMQ5T4B2 595 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 DCAF12Q5T6F0 453 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 ARHGAP17Q68EM7 881 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 TP53INP2Q8IXH6 220 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 C12orf56Q8IXR9 622 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 CCAR2Q8N163 923 aaKnown RBP9.72□□□□□ -0.85
HERC1-210ENST00000560897 AGBL5Q8NDL9 886 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 RCBTB1Q8NDN9 531 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 ART4Q93070 314 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 FCRL2Q96LA5 508 aaPredicted RBP9.72□□□□□ -0.85
HERC1-210ENST00000560897 SLC39A1Q9NY26 324 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 ERRFI1Q9UJM3 462 aaPredicted RBP9.72□□□□□ -0.85
HERC1-210ENST00000560897 SLC5A6Q9Y289 635 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 TLR6Q9Y2C9 796 aa9.72□□□□□ -0.85
HERC1-210ENST00000560897 ZNF106Q9H2Y7 1883 aaKnown RBP9.72□□□□□ -0.85
HERC1-210ENST00000560897 IGLON5A6NGN9 336 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 K7EM74 188 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TULP2O00295 520 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TOR1BO14657 336 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 INPP4BO15327 924 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TSPAN6O43657 245 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 LTFP02788 710 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 FGF3P11487 239 aaPredicted RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 VARSP26640 1264 aaKnown RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 HTR1BP28222 390 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 GJB2P29033 226 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 EIF4A3P38919 411 aaKnown RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 LEPRP48357 1165 aaKnown RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 HK3P52790 923 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 KRT83P78385 493 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 AMPD3Q01432 767 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 NNTQ13423 1086 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 BIRC2Q13490 618 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 CRTC2Q53ET0 693 aaPredicted RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 EPM2AIP1Q7L775 607 aaPredicted RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 RD3Q7Z3Z2 195 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 VPS36Q86VN1 386 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 CIR1Q86X95 450 aaPredicted RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 FAM129CQ86XR2 697 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 ATL2Q8NHH9 583 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 IRGQQ8WZA9 623 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 PMEPA1Q969W9 287 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 POM121Q96HA1 1249 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 MS4A3Q96HJ5 214 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 CCDC74BQ96LY2 380 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TEFMQ96QE5 360 aaKnown RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 KLF6Q99612 283 aaPredicted RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 PANK2Q9BZ23 570 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 MUC3BQ9H195 1237 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TNMDQ9H2S6 317 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 RDH14Q9HBH5 336 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 APOBEC3GQ9HC16 384 aaKnown RBP9.71□□□□□ -0.86
HERC1-210ENST00000560897 LRIT1Q9P2V4 623 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 SLC12A6Q9UHW9 1150 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 ITGB1BP2Q9UKP3 347 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TSPAN16Q9UKR8 245 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 MAP4K5Q9Y4K4 846 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 FADS3Q9Y5Q0 445 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 KCNMB2Q9Y691 235 aa9.71□□□□□ -0.86
HERC1-210ENST00000560897 TCP11X1B4DZS4 312 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 IKBKBO14920 756 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 AP1G1O43747 822 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 LEFTY1O75610 366 aa9.7□□□□□ -0.86
HERC1-210ENST00000560897 SETSIPP0DME0 302 aa9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms