RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 TRIM49D1C9J1S8 452 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 J3KR12 359 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 GREM1O60565 184 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 NEBLO76041 1014 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 HMBSP08397 361 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 TAC1P20366 129 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 KCNA5P22460 613 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 DDX6P26196 483 aaKnown RBP eCLIP10.35□□□□□ -0.75
SNF8-214ENST00000515174 HOXD9P28356 352 aaPredicted RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 CDC25CP30307 473 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 CORO1AP31146 461 aaKnown RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 HOXA9P31269 272 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 CA8P35219 290 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 RPA3P35244 121 aaPredicted RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 SPRP35270 261 aaPredicted RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 MAGEA12P43365 314 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 CCT5P48643 541 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 EPHA5P54756 1037 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 WNT3AP56704 352 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 SLC10A7Q0GE19 358 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 ZNF177Q13360 481 aaPredicted RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 MTM1Q13496 603 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 ITIH4Q14624 930 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 LBRQ14739 615 aaKnown RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 RALGPS1Q5JS13 557 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 CERCAMQ5T4B2 595 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 TEDDM1Q5T9Z0 273 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 PLPP4Q5VZY2 271 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 PDPK2PQ6A1A2 396 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 PDE12Q6L8Q7 609 aaKnown RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 PACS1Q6VY07 963 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 HTR3DQ70Z44 454 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 NLRP9Q7RTR0 991 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 TFAP2DQ7Z6R9 452 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 TMC8Q8IU68 726 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 DENND1CQ8IV53 801 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 LRRC34Q8IZ02 419 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 CPXM2Q8N436 756 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 ANKRD42Q8N9B4 389 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 SPATA22Q8NHS9 363 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 SERAC1Q96JX3 654 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 CABS1Q96KC9 395 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 PSKH2Q96QS6 385 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 PLCD4Q9BRC7 762 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 POLR1EQ9GZS1 481 aaKnown RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 UBE2ZQ9H832 354 aaPredicted RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 SEPT3Q9UH03 358 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 PLLPQ9Y342 182 aa10.35□□□□□ -0.75
SNF8-214ENST00000515174 ZFP37Q9Y6Q3 630 aaPredicted RBP10.35□□□□□ -0.75
SNF8-214ENST00000515174 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 ERICH4A6NGS2 130 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 FOXO6A8MYZ6 492 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 KLF11O14901 512 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 SNX3O60493 162 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 LPXNO60711 386 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 USP12O75317 370 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 SPAG7O75391 227 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 MT-CYBP00156 380 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 LRG1P02750 347 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 MMP2P08253 660 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 PYGBP11216 843 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 HDCP19113 662 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 PSMA3P25788 255 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 OXCT1P55809 520 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 NSUN2Q08J23 767 aaKnown RBP eCLIP10.34□□□□□ -0.75
SNF8-214ENST00000515174 SLC1A5Q15758 541 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 INO80DQ53TQ3 878 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 FAM182AQ5T1J6 154 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 HHATQ5VTY9 493 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 KIAA0930Q6ICG6 404 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 KYAT3Q6YP21 454 aaKnown RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 EP400NLQ6ZTU2 488 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 TMC7Q7Z402 723 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 GALNT7Q86SF2 657 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 LCA5Q86VQ0 697 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 TRIM42Q8IWZ5 723 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 LMNTD2Q8IXW0 634 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 CACNA2D3Q8IZS8 1091 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 C4orf33Q8N1A6 199 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 ELMOD1Q8N336 334 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 KIAA1958Q8N8K9 716 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 ANKS4BQ8N8V4 417 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 LEMD2Q8NC56 503 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 KREMEN2Q8NCW0 462 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 GABPB2Q8TAK5 448 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 RAB3IL1Q8TBN0 382 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 SPPL3Q8TCT6 385 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 TCP10LQ8TDR4 215 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 USP33Q8TEY7 942 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 SCG3Q8WXD2 468 aaKnown RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 SPOCK2Q92563 424 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 MRPS31Q92665 395 aaKnown RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 ZNF669Q96BR6 464 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 MYEOVQ96EZ4 313 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 SEC16BQ96JE7 1060 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 FEM1CQ96JP0 617 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 MGME1Q9BQP7 344 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 KIF9Q9HAQ2 790 aa10.34□□□□□ -0.75
SNF8-214ENST00000515174 ZNF334Q9HCZ1 680 aaPredicted RBP10.34□□□□□ -0.75
SNF8-214ENST00000515174 ALG13Q9NP73 1137 aaKnown RBP10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms