RNA–Protein interactions for RNA: ENST00000513582.5

PDCD6-210, Transcript of programmed cell death 6, human

TSL 2

Gene PDCD6, Length 3,500 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDCD6-210	ENST00000513582	IFT80	Q9P2H3	777 aa	Predicted RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	VPS28	Q9UK41	221 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	GCAT	O75600	419 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	MFN2	O95140	757 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	LTF	P02788	710 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PRKACB	P22694	351 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	POLD3	Q15054	466 aa	Predicted RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	HADH	Q16836	314 aa	Known RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	GLRA4	Q5JXX5	417 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	TBCEL	Q5QJ74	424 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	TREML2	Q5T2D2	321 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	FAM102A	Q5T9C2	384 aa	Predicted RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	SIGIRR	Q6IA17	410 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	SLCO6A1	Q86UG4	719 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	CAMK1D	Q8IU85	385 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	C12orf56	Q8IXR9	622 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PAF1	Q8N7H5	531 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	OR13F1	Q8NGS4	319 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	FAM151A	Q8WW52	585 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	APBB2	Q92870	758 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PGLYRP2	Q96PD5	576 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	ILKAP	Q9H0C8	392 aa	Predicted RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	FAM49A	Q9H0Q0	323 aa	Predicted RBP	11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	PKD2L2	Q9NZM6	624 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	OAZ3	Q9UMX2	235 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	AKT3	Q9Y243	479 aa		11.27	□□□□□ -0.61
PDCD6-210	ENST00000513582	NAV1	Q8NEY1	1877 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	IGKV6D-41	A0A0C4DH26	115 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	HEATR9	A2RTY3	570 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	TCAF2	A6NFQ2	919 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	SNPH	O15079	494 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PMM2	O15305	246 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	MAN1A2	O60476	641 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	ICMT	O60725	284 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CRYZL1	O95825	349 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CDH1	P12830	882 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	KCNA2	P16389	499 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	POLR2E	P19388	210 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CCND2	P30279	289 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PTPN7	P35236	360 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	SEPHS1	P49903	392 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CDH6	P55285	790 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	FPGS	Q05932	587 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CUL2	Q13617	745 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	DDX59	Q5T1V6	619 aa	Known RBP eCLIP	11.26	□□□□□ -0.61	3e-6	■■■■■ 38.7
PDCD6-210	ENST00000513582	CRTC3	Q6UUV7	619 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	MAGEE2	Q8TD90	523 aa	Predicted RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PLEKHA5	Q9HAU0	1116 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	APOBEC3G	Q9HC16	384 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	FASTKD2	Q9NYY8	710 aa	Known RBP eCLIP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	KCND2	Q9NZV8	630 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	MTRR	Q9UBK8	725 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PCDHGA7	Q9Y5G6	932 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	COPG1	Q9Y678	874 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PLIN4	Q96Q06	1357 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CDK5RAP2	Q96SN8	1893 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	EI24	O14681	340 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	DLGAP3	O95886	979 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CCNE2	O96020	404 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PGK2	P07205	417 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	KRT7	P08729	469 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	TNFSF9	P41273	254 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	TMBIM6	P55061	237 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	RACK1	P63244	317 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	GTF2B	Q00403	316 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	SLC25A11	Q02978	314 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PIGF	Q07326	219 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	AQP6	Q13520	282 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	GPR162	Q16538	588 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	ZIK1	Q3SY52	487 aa	Predicted RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	RSBN1	Q5VWQ0	802 aa	Predicted RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	GET4	Q7L5D6	327 aa	Predicted RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	EPHX4	Q8IUS5	362 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	FAM20C	Q8IXL6	584 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PSMA8	Q8TAA3	256 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CERK	Q8TCT0	537 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	EBNA1BP2	Q99848	306 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	IL1RL2	Q9HB29	575 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	AGO4	Q9HCK5	861 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	ABCB10	Q9NRK6	738 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	TMEM9	Q9P0T7	183 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582		M0QYV0	167 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	IDH3B	O43837	385 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	MT-ND1	P03886	318 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	KRT3	P12035	628 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	ACO1	P21399	889 aa	Known RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PGGT1B	P53609	377 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	WNT7B	P56706	349 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	SESN2	P58004	480 aa	Predicted RBP	11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	ACTR2	P61160	394 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	LRIT3	Q3SXY7	679 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	SLC43A3	Q8NBI5	491 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	GOLM1	Q8NBJ4	401 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	RAB2B	Q8WUD1	216 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	NACC2	Q96BF6	587 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PDCD2L	Q9BRP1	358 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	ZBTB26	Q9HCK0	441 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	CDYL	Q9Y232	598 aa		11.26	□□□□□ -0.61
PDCD6-210	ENST00000513582	PRRC2B	Q5JSZ5	2229 aa	Known RBP	11.25	□□□□□ -0.61
PDCD6-210	ENST00000513582	PALM2-AKAP2	B1ALY0	433 aa	Predicted RBP	11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms