RNA–Protein interactions for RNA: ENST00000511955.5

TRAPPC11-208, Transcript of trafficking protein particle complex 11, humanhuman

TSL 2

Gene TRAPPC11, Length 2,342 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-208ENST00000511955 REXO1L1PQ8IX06 675 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADGRF4Q8IZF3 695 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ADGRG2Q8IZP9 1017 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF687Q8N1G0 1237 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RASGEF1CQ8N431 466 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCDC155Q8N6L0 562 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 POU5F2Q8N7G0 328 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR13C2Q8NGS9 318 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 STARD8Q92502 1023 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TTC9Q92623 222 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 WNT8BQ93098 351 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SAAL1Q96ER3 474 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RBM41Q96IZ5 413 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 C7orf34Q96L11 122 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NECAB3Q96P71 396 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PANX2Q96RD6 677 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 DMRTA2Q96SC8 542 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC9A7Q96T83 725 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAD9AQ99638 391 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TBC1D10AQ9BXI6 508 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SPATC1LQ9H0A9 340 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RNPEPQ9H4A4 650 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAD21L1Q9H4I0 556 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MRPL44Q9H9J2 332 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MRM3Q9HC36 420 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MRPL40Q9NQ50 206 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CENPMQ9NSP4 180 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 DDX28Q9NUL7 540 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TBC1D23Q9NUY8 699 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RGL1Q9NZL6 768 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MRPL15Q9P015 296 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PAIP2BQ9ULR5 123 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MYO6Q9UM54 1294 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TBX20Q9UMR3 447 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 GABRQQ9UN88 632 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 GAB2Q9UQC2 676 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MAN2B2Q9Y2E5 1009 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 STXBP5LQ9Y2K9 1186 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 THSD7BQ9C0I4 1608 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SH3D21A4FU49 640 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MEIS3P2A8K0S8 358 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 E9PMD0 336 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 DNM1LO00429 736 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PIP5K1BO14986 540 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CHUKO15111 745 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CNMDO75829 334 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PSMD10O75832 226 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PFKMP08237 780 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CCDC192P0DO97 292 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ELNP15502 786 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CHN1P15882 459 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CKMT2P17540 419 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CYP2B6P20813 491 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 AOAHP28039 575 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RFC2P35250 354 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 HARS2P49590 506 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NME5P56597 212 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ERVFC1P60507 584 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NIPAL4Q0D2K0 466 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF177Q13360 481 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TDGQ13569 410 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CAPSQ13938 189 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 DMC1Q14565 340 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CASP8Q14790 479 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 GPR68Q15743 365 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NTRK3Q16288 839 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 UGP2Q16851 508 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM187BQ17R55 369 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 LIN9Q5TKA1 542 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TDRD10Q5VZ19 366 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ATG16L1Q676U5 607 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SLC36A4Q6YBV0 504 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 USP49Q70CQ1 688 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 OTOP1Q7RTM1 612 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MFN1Q8IWA4 741 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 NECAB1Q8N987 351 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 OR8K5Q8NH50 307 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 FAM71BQ8TC56 605 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CHURC1Q8WUH1 139 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 DCAF4Q8WV16 495 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 MARVELD3Q96A59 401 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 FGD4Q96M96 766 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TWNKQ96RR1 684 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SECISBP2Q96T21 854 aaKnown RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 JPH2Q9BR39 696 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TEX12Q9BXU0 123 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 TREM1Q9NP99 234 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAB6BQ9NRW1 208 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 LMBRD1Q9NUN5 540 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 RAB20Q9NX57 234 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 PKD2L2Q9NZM6 624 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 KANSL3Q9P2N6 904 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 CD300AQ9UGN4 299 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 ZNF214Q9UL59 606 aaPredicted RBP5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 SPACA6W5XKT8 324 aa5.12□□□□□ -1.59
TRAPPC11-208ENST00000511955 BAZ2BQ9UIF8 2168 aaKnown RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 GREB1LQ9C091 1923 aaPredicted RBP5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 LOC285556D6RIA3 1793 aa5.11□□□□□ -1.59
TRAPPC11-208ENST00000511955 MFSD2BA6NFX1 497 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms