RNA–Protein interactions for RNA: ENST00000508531.1

PDLIM5-211, Transcript of PDZ and LIM domain 5, humanhuman

TSL 4

Gene PDLIM5, Length 480 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-211ENST00000508531 TMEM154Q6P9G4 183 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 TRIM72Q6ZMU5 477 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PIGWQ7Z7B1 504 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ST13P4Q8IZP2 240 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ARHGAP24Q8N264 748 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 CELF5Q8N6W0 485 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ENDOVQ8N8Q3 282 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 NECAB1Q8N987 351 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 AGAP11Q8TF27 550 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 WDR60Q8WVS4 1066 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SLC35A4Q96G79 324 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 RITA1Q96K30 269 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 C8orf76Q96K31 380 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 CCDC43Q96MW1 224 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ZIM3Q96PE6 472 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 NEK1Q96PY6 1258 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 TMEM237Q96Q45 408 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 NUP88Q99567 741 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 MEIS3Q99687 375 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SH3GL1Q99961 368 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 DESI2Q9BSY9 194 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 FAM129AQ9BZQ8 928 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 FTOQ9C0B1 505 aaKnown RBP eCLIP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PRSS22Q9GZN4 317 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 CARD9Q9H257 536 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 RNPEPL1Q9HAU8 725 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 GDF3Q9NR23 364 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SUCLA2Q9P2R7 463 aaPredicted RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SRP68Q9UHB9 627 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SLC12A6Q9UHW9 1150 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ASAP1Q9ULH1 1129 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 NDRG4Q9ULP0 352 aaKnown RBP4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SNX12Q9UMY4 172 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 PCDHA6Q9UN73 950 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 HPSEQ9Y251 543 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 SPEF1Q9Y4P9 236 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 NCAPD2Q15021 1401 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 A0A0C4DFX4 3053 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 KIAA1551Q9HCM1 1747 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 C5P01031 1676 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 USP54Q70EL1 1684 aa4.77□□□□□ -1.65
PDLIM5-211ENST00000508531 ARHGAP10A1A4S6 786 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 SPECC1L-ADORA2AF8WAN1 911 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 hCG_1984214I3L0E3 225 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 NDC80O14777 642 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 NVLO15381 856 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 MGEA5O60502 916 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 MBD4O95243 580 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 PDE8BO95263 885 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 GRPP07492 148 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 C4BP0C0L5 1744 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 CCNB1P14635 433 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 PORP16435 677 aaPredicted RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 STIP1P31948 543 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 PBX1P40424 430 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 TPTEP56180 551 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 IRX4P78413 519 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 ST3GAL1Q11201 340 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 E2F2Q14209 437 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 CNGA3Q16281 694 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 KHDC1LQ5JSQ8 128 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 ERMARDQ5T6L9 678 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 DAB2IPQ5VWQ8 1189 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 RESP18Q5W5W9 173 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 FCRL6Q6DN72 434 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 ANO7Q6IWH7 933 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 FAM173BQ6P4H8 233 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 RAD9BQ6WBX8 426 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 Q6ZWC4 215 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 TBC1D1Q86TI0 1168 aaPredicted RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 SPATA24Q86W54 205 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 ANKRD13BQ86YJ7 626 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 GALNT16Q8N428 558 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 TSPYL6Q8N831 410 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 SCAIQ8N9R8 606 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 C8orf58Q8NAV2 365 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 SPATA4Q8NEY3 305 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 RP9Q8TA86 221 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 DOT1LQ8TEK3 1739 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 TRPC4APQ8TEL6 797 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 WASF1Q92558 559 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 DAZAP1Q96EP5 407 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 VPS50Q96JG6 964 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 NEUROD6Q96NK8 337 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 XPO6Q96QU8 1125 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 MMS19Q96T76 1030 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 VPS16Q9H269 839 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 HSD3B7Q9H2F3 369 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 TAOK3Q9H2K8 898 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 ANLNQ9NQW6 1124 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 ATP8A2Q9NTI2 1148 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 CYP39A1Q9NYL5 469 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 PTTG2Q9NZH5 202 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 AIPL1Q9NZN9 384 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 GUCA1BQ9UMX6 200 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 MRPS17Q9Y2R5 130 aaKnown RBP4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 PLEKHM1Q9Y4G2 1056 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 FADS3Q9Y5Q0 445 aa4.76□□□□□ -1.65
PDLIM5-211ENST00000508531 WDR19Q8NEZ3 1342 aa4.75□□□□□ -1.65
PDLIM5-211ENST00000508531 SALL1Q9NSC2 1324 aa4.75□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms