RNA–Protein interactions for RNA: ENST00000479591.1

TM9SF4-206, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 2

Gene TM9SF4, Length 566 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-206ENST00000479591 OPA1O60313 960 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 AVILO75366 819 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 PMPCBO75439 489 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ADRA1AP35348 466 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ELK3P41970 407 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 GRIA1P42261 906 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 DGKGP49619 791 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 WNT3AP56704 352 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 RHOAP61586 193 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 SKOR1P84550 965 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 SPARCL1Q14515 664 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 FUT11Q495W5 492 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ASTLQ6HA08 431 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 GPR153Q6NV75 609 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 LINGO4Q6UY18 593 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 RANBP10Q6VN20 620 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 OR52K1Q8NGK4 314 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 TTC17Q96AE7 1141 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ASIC4Q96FT7 647 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 FEM1CQ96JP0 617 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 MRGPRX2Q96LB1 330 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 EBNA1BP2Q99848 306 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 CCDC77Q9BR77 488 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 FICDQ9BVA6 458 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ROPN1BQ9BZX4 212 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 IL22Q9GZX6 179 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 EBF3Q9H4W6 596 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ECT2Q9H8V3 914 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ROPN1Q9HAT0 212 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ARNT2Q9HBZ2 717 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 LRRC4CQ9HCJ2 640 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 SCUBE2Q9NQ36 999 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 HS3ST2Q9Y278 367 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 SLC27A6Q9Y2P4 619 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 USP15Q9Y4E8 981 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ARIH1Q9Y4X5 557 aaPredicted RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 ACTL7AQ9Y615 435 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 NFS1Q9Y697 457 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 MYOFQ9NZM1 2061 aa12.12□□□□□ -0.47
TM9SF4-206ENST00000479591 MIA3Q5JRA6 1907 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 MAGEB16A2A368 324 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 GOLGA6L10A6NI86 522 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 USP12O75317 370 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 BANF1O75531 89 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 EPOP01588 193 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ASLP04424 464 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 IVLP07476 585 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ARSAP15289 507 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 POLR2EP19388 210 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 CA4P22748 312 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 MGAT1P26572 445 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 MAPK8P45983 427 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 CSNK1DP48730 415 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 NUMBP49757 651 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 VASPP50552 380 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 SESN2P58004 480 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 AP1S1P61966 158 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 RUNX3Q13761 415 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 STAT4Q14765 748 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 HSP90B2PQ58FF3 399 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 HP1BP3Q5SSJ5 553 aaPredicted RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 C3orf62Q6ZUJ4 267 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ETFBKMTQ8IXQ9 262 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 AGGF1Q8N302 714 aaeCLIP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 GOLGA6L1Q8N7Z2 621 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 NAT16Q8N8M0 369 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ISG20Q96AZ6 181 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 STAMBPL1Q96FJ0 436 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 IFT43Q96FT9 208 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 LRCH3Q96II8 777 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ZFYVE19Q96K21 471 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 FAM161BQ96MY7 647 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 TMEM109Q9BVC6 243 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 CEP44Q9C0F1 390 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 VPS37BQ9H9H4 285 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 PPCSQ9HAB8 311 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 MED4Q9NPJ6 270 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 HPS4Q9NQG7 708 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 SAMD15Q9P1V8 674 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 LHX3Q9UBR4 397 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 ZC3H7BQ9UGR2 993 aaKnown RBP12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 MAD1L1Q9Y6D9 718 aa12.11□□□□□ -0.47
TM9SF4-206ENST00000479591 SZT2Q5T011 3432 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 LOC285095A0A1B0GVY8 99 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 AGPSO00116 658 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 TULP3O75386 442 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 TCEA3O75764 348 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 IGSF6O95976 241 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 MT-CO1P00395 513 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 AGTP01019 485 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 CISD3P0C7P0 127 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 SRCP12931 536 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 PGAM1P18669 254 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 HLA-DPA1P20036 260 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 STX2P32856 288 aa12.1□□□□□ -0.47
TM9SF4-206ENST00000479591 EIF2DP41214 584 aaKnown RBP12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms