RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 TM6SF2Q9BZW4 377 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 C8orf33Q9H7E9 229 aaPredicted RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 KCNK12Q9HB15 430 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 SAYSD1Q9NPB0 183 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 ELOVL2Q9NXB9 296 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 FBXO10Q9UK96 956 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 ERVW-1Q9UQF0 538 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 HS3ST2Q9Y278 367 aa9.9□□□□□ -0.82
CCM2-204ENST00000470837 FCF1Q9Y324 198 aaKnown RBP9.9□□□□□ -0.82
CCM2-204ENST00000470837 SDR42E2A6NKP2 422 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 TMEM63AO94886 807 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 SUN1O94901 812 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 KAT7O95251 611 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 MT-CYBP00156 380 aaPredicted RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 MT-CO1P00395 513 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 FAM153BP0C7A2 387 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 CISD3P0C7P0 127 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 ECHS1P30084 290 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 PHBP35232 272 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 EPHB1P54762 984 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 WNT3AP56704 352 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 SESN2P58004 480 aaPredicted RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 IFFO1Q0D2I5 559 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 CDH17Q12864 832 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 LAMB3Q13751 1172 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 SPARCL1Q14515 664 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 GRM3Q14832 879 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 DLG2Q15700 870 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 SLC14A2Q15849 920 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 GEN1Q17RS7 908 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 FAM153CQ494X1 144 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 BEND6Q5SZJ8 279 aaPredicted RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 DENND2CQ68D51 928 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 ASTLQ6HA08 431 aaPredicted RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 C22orf39Q6P5X5 142 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 TMC3Q7Z5M5 1100 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 SRLQ86TD4 932 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 ADIPOR2Q86V24 386 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 C12orf40Q86WS4 652 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 CCNJLQ8IV13 435 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 NDUFAF2Q8N183 169 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 SH2D3CQ8N5H7 860 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 TERB1Q8NA31 727 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 DNASE1L2Q92874 299 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 ISG20Q96AZ6 181 aaKnown RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 EXOC2Q96KP1 924 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 LMLNQ96KR4 655 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 P2RY13Q9BPV8 354 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 CCDC77Q9BR77 488 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 NAT9Q9BTE0 207 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 RPP25Q9BUL9 199 aaKnown RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 FICDQ9BVA6 458 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 NEUROG2Q9H2A3 272 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 ATP13A3Q9H7F0 1226 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 INTS6Q9UL03 887 aaKnown RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 ARIH1Q9Y4X5 557 aaPredicted RBP9.89□□□□□ -0.83
CCM2-204ENST00000470837 MAD1L1Q9Y6D9 718 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 ATG2AQ2TAZ0 1938 aa9.89□□□□□ -0.83
CCM2-204ENST00000470837 TCRBV7S3A2A0A539 114 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 MAGEB16A2A368 324 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 OTOL1A6NHN0 477 aaPredicted RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 K7ERQ8 282 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 POP4O95707 220 aaKnown RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 GSRP00390 522 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 SRCP12931 536 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 HLA-DPA1P20036 260 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 NFKBIAP25963 317 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 SERPINA4P29622 427 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 CTSOP43234 321 aaPredicted RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 MAGEA4P43358 317 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 SLC6A11P48066 632 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 CSNK1DP48730 415 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 NPY2RP49146 381 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 STK19P49842 368 aaPredicted RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 CDK18Q07002 472 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 BCL2L1Q07817 233 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 GRSF1Q12849 480 aaKnown RBP eCLIP9.88□□□□□ -0.83
CCM2-204ENST00000470837 GPS2Q13227 327 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 CCDC38Q502W7 563 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 CARD16Q5EG05 197 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 SPDYCQ5MJ68 293 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 FAM182AQ5T1J6 154 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 ALG1LQ6GMV1 187 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 SDE2Q6IQ49 451 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 KDELC2Q7Z4H8 507 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 KIAA0907Q7Z7F0 614 aaPredicted RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 RALGPS2Q86X27 583 aaPredicted RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 RNF135Q8IUD6 432 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 PGBD5Q8N414 524 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 SLC44A3Q8N4M1 653 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 GOLGA6L1Q8N7Z2 621 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 KDM1BQ8NB78 822 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 OR2AP1Q8NGE2 309 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 OR52K1Q8NGK4 314 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 ARRDC2Q8TBH0 407 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 CYB5D2Q8WUJ1 264 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 PDCD6IPQ8WUM4 868 aaKnown RBP9.88□□□□□ -0.83
CCM2-204ENST00000470837 RMDN1Q96DB5 314 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 MSANTD3Q96H12 275 aa9.88□□□□□ -0.83
CCM2-204ENST00000470837 OXNAD1Q96HP4 312 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms