RNA–Protein interactions for RNA: ENST00000461873.5

LDB1-203, Transcript of LIM domain binding 1, humanhuman

TSL 2

Gene LDB1, Length 478 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB1-203ENST00000461873 C16orf96A6NNT2 1141 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 SDC3O75056 442 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 PAK4O96013 591 aaPredicted RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 WNT1P04628 370 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 UGT2B4P06133 528 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 CTSLP07711 333 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 MYBL1P10243 752 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ATP1A3P13637 1013 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 CKMT2P17540 419 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 RABIFP47224 123 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 RXRGP48443 463 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 METAP1P53582 386 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 HDAC4P56524 1084 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 HNRNPKP61978 463 aaKnown RBP eCLIP9.01□□□□□ -0.97
LDB1-203ENST00000461873 ARF5P84085 180 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 E2F1Q01094 437 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ELP6Q0PNE2 266 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 BNIP3Q12983 259 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ILKQ13418 452 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 TSR1Q2NL82 804 aaKnown RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 MYLK3Q32MK0 819 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 INO80DQ53TQ3 878 aaPredicted RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 KCNT1Q5JUK3 1230 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 TRNP1Q6NT89 227 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 DHRS13Q6UX07 377 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 GDPD4Q6W3E5 623 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 CCNI2Q6ZMN8 369 aaPredicted RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 LEKR1Q6ZMV7 388 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 Q6ZSR6 202 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 MON1BQ7L1V2 547 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 GAS2L3Q86XJ1 694 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 MCOLN2Q8IZK6 566 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 PDCD7Q8N8D1 485 aaKnown RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 KNL1Q8NG31 2342 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 OR6K2Q8NGY2 324 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 SAP25Q8TEE9 199 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 BTN2A2Q8WVV5 523 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 CENPIQ92674 756 aaPredicted RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 GATA6Q92908 595 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ARRDC3Q96B67 414 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 KLHL32Q96NJ5 620 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ORAI3Q9BRQ5 295 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 DUSP23Q9BVJ7 150 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 TRPM6Q9BX84 2022 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 DHX35Q9H5Z1 703 aaKnown RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 HAUS4Q9H6D7 363 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ZWILCHQ9H900 591 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 SP110Q9HB58 689 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 FZD3Q9NPG1 666 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 RTN4Q9NQC3 1192 aaKnown RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 KLHL11Q9NVR0 708 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 HAUS2Q9NVX0 235 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 ARHGAP20Q9P2F6 1191 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 MYO1AQ9UBC5 1043 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 UBA2Q9UBT2 640 aaPredicted RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 FZD10Q9ULW2 581 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 HS3ST3A1Q9Y663 406 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 BZW2Q9Y6E2 419 aaKnown RBP9.01□□□□□ -0.97
LDB1-203ENST00000461873 AK5Q9Y6K8 562 aa9.01□□□□□ -0.97
LDB1-203ENST00000461873 TDRD6O60522 2096 aaKnown RBP9□□□□□ -0.97
LDB1-203ENST00000461873 A0A1W2PQC6 194 aa9□□□□□ -0.97
LDB1-203ENST00000461873 RASA4BC9J798 803 aa9□□□□□ -0.97
LDB1-203ENST00000461873 I6L893 689 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 FFAR2O15552 330 aa9□□□□□ -0.97
LDB1-203ENST00000461873 RASA4O43374 803 aa9□□□□□ -0.97
LDB1-203ENST00000461873 AP1G1O43747 822 aa9□□□□□ -0.97
LDB1-203ENST00000461873 PALMO75781 387 aa9□□□□□ -0.97
LDB1-203ENST00000461873 TM7SF2O76062 418 aa9□□□□□ -0.97
LDB1-203ENST00000461873 TMCC1O94876 653 aa9□□□□□ -0.97
LDB1-203ENST00000461873 FTLP02792 175 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 TPM1P09493 284 aa9□□□□□ -0.97
LDB1-203ENST00000461873 HTR1BP28222 390 aa9□□□□□ -0.97
LDB1-203ENST00000461873 ARL4AP40617 200 aa9□□□□□ -0.97
LDB1-203ENST00000461873 SSR1P43307 286 aaKnown RBP9□□□□□ -0.97
LDB1-203ENST00000461873 SUOXP51687 545 aa9□□□□□ -0.97
LDB1-203ENST00000461873 ZNF135P52742 658 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 RPL7AP62424 266 aaKnown RBP9□□□□□ -0.97
LDB1-203ENST00000461873 POLR2LP62875 67 aaKnown RBP9□□□□□ -0.97
LDB1-203ENST00000461873 PDE1CQ14123 709 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 ZNF284Q2VY69 593 aa9□□□□□ -0.97
LDB1-203ENST00000461873 PPP6R3Q5H9R7 873 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 ZFYVE27Q5T4F4 411 aa9□□□□□ -0.97
LDB1-203ENST00000461873 ERMARDQ5T6L9 678 aa9□□□□□ -0.97
LDB1-203ENST00000461873 LRRC69Q6ZNQ3 347 aa9□□□□□ -0.97
LDB1-203ENST00000461873 BNIPLQ7Z465 357 aa9□□□□□ -0.97
LDB1-203ENST00000461873 DNAAF5Q86Y56 855 aa9□□□□□ -0.97
LDB1-203ENST00000461873 ATL2Q8NHH9 583 aa9□□□□□ -0.97
LDB1-203ENST00000461873 BAHD1Q8TBE0 780 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 SCG3Q8WXD2 468 aaKnown RBP9□□□□□ -0.97
LDB1-203ENST00000461873 FAM131CQ96AQ9 280 aa9□□□□□ -0.97
LDB1-203ENST00000461873 ZNF653Q96CK0 615 aa9□□□□□ -0.97
LDB1-203ENST00000461873 IQCDQ96DY2 449 aa9□□□□□ -0.97
LDB1-203ENST00000461873 IFT43Q96FT9 208 aa9□□□□□ -0.97
LDB1-203ENST00000461873 CINPQ9BW66 212 aaPredicted RBP9□□□□□ -0.97
LDB1-203ENST00000461873 EDEM3Q9BZQ6 932 aa9□□□□□ -0.97
LDB1-203ENST00000461873 TTYH3Q9C0H2 523 aa9□□□□□ -0.97
LDB1-203ENST00000461873 NCKIPSDQ9NZQ3 722 aa9□□□□□ -0.97
LDB1-203ENST00000461873 CNOT8Q9UFF9 292 aaKnown RBP9□□□□□ -0.97
LDB1-203ENST00000461873 PCSK1NQ9UHG2 260 aa9□□□□□ -0.97
LDB1-203ENST00000461873 AP4E1Q9UPM8 1137 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms