RNA–Protein interactions for RNA: ENST00000439541.6

CBX5-202, Transcript of chromobox 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX5, Length 1,832 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX5-202ENST00000439541 TPX2Q9ULW0 747 aaKnown RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 NOVA2Q9UNW9 492 aaKnown RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 MTSS1O43312 755 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 CACNG3O60359 315 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 ECI2O75521 394 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 MT-CYBP00156 380 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 APRTP07741 180 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 PABPC1P11940 636 aaKnown RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 BMP1P13497 986 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 GRIA1P42261 906 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 MMP13P45452 471 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 SLC6A11P48066 632 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 SOX9P48436 509 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 PMS2P54278 862 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 DSC2Q02487 901 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 ACTN3Q08043 901 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 SPARCL1Q14515 664 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 IHHQ14623 411 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 SLMAPQ14BN4 828 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 PDGFRLQ15198 375 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 RNF187Q5TA31 235 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 MARC1Q5VT66 337 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 TMEM215Q68D42 235 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 DENND2CQ68D51 928 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 ZNF783Q6ZMS7 281 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 LRRC49Q8IUZ0 686 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 CCDC117Q8IWD4 279 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 CACNA2D3Q8IZS8 1091 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 NAT8LQ8N9F0 302 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 OR2W6PQ8NHA6 318 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 SORCS1Q8WY21 1168 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 HLA-CQ95604 372 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 TLCD1Q96CP7 247 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 OXNAD1Q96HP4 312 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 RPL10LQ96L21 214 aaKnown RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 FERMT1Q9BQL6 677 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 RETREG1Q9H6L5 497 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 THG1LQ9NWX6 298 aaKnown RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 KIAA1522Q9P206 1035 aaPredicted RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 ATP8A1Q9Y2Q0 1164 aa10.17□□□□□ -0.78
CBX5-202ENST00000439541 FCF1Q9Y324 198 aaKnown RBP10.17□□□□□ -0.78
CBX5-202ENST00000439541 ANTXRLA6NF34 631 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 VGLL3A8MV65 326 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 ANHXE9PGG2 379 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 ARNTLO00327 626 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 USP12O75317 370 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 TULP3O75386 442 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 NEBLO76041 1014 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 TMCC1O94876 653 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 ASGR2P07307 311 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 HNRNPH1P31943 449 aaKnown RBP10.16□□□□□ -0.78
CBX5-202ENST00000439541 MAGOHP61326 146 aaKnown RBP10.16□□□□□ -0.78
CBX5-202ENST00000439541 ITKQ08881 620 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 NIPAL4Q0D2K0 466 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 IFT88Q13099 833 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 SEMA5AQ13591 1074 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 HNRNPDQ14103 355 aaKnown RBP10.16□□□□□ -0.78
CBX5-202ENST00000439541 ZNF235Q14590 738 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 AAK1Q2M2I8 961 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 GPR153Q6NV75 609 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 MTSS1LQ765P7 747 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 ADIPOR2Q86V24 386 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 ETFBKMTQ8IXQ9 262 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 PPIL6Q8IXY8 311 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 TEX26Q8N6G2 289 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 PDCD7Q8N8D1 485 aaKnown RBP10.16□□□□□ -0.78
CBX5-202ENST00000439541 GLOD4Q9HC38 313 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 IGSF9Q9P2J2 1179 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 SHOC2Q9UQ13 582 aa10.16□□□□□ -0.78
CBX5-202ENST00000439541 KIAA1549LQ6ZVL6 1849 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 SMAD6O43541 496 aaKnown RBP10.15□□□□□ -0.78
CBX5-202ENST00000439541 IL9P15248 144 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 ITIH2P19823 946 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 DGKGP49619 791 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 RENBPP51606 427 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 RUNX3Q13761 415 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 FASTKD3Q14CZ7 662 aaKnown RBP10.15□□□□□ -0.78
CBX5-202ENST00000439541 MORF4L2Q15014 288 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 CYTH1Q15438 398 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 HP1BP3Q5SSJ5 553 aaPredicted RBP10.15□□□□□ -0.78
CBX5-202ENST00000439541 ITPRIPL1Q6GPH6 555 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 ZNF534Q76KX8 674 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 CPLX4Q7Z7G2 160 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 CPA6Q8N4T0 437 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 OR6K2Q8NGY2 324 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 CYB5D2Q8WUJ1 264 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 NSMCE1Q8WV22 266 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 FATE1Q969F0 183 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 NXPE3Q969Y0 559 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 E2F7Q96AV8 911 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 NSMCE3Q96MG7 304 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 RBM15Q96T37 977 aaKnown RBP eCLIP10.15□□□□□ -0.78
CBX5-202ENST00000439541 VAT1Q99536 393 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 APOL2Q9BQE5 337 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 C2orf49Q9BVC5 232 aaPredicted RBP10.15□□□□□ -0.78
CBX5-202ENST00000439541 TMEM109Q9BVC6 243 aa10.15□□□□□ -0.78
CBX5-202ENST00000439541 TRMT61BQ9BVS5 477 aaKnown RBP10.15□□□□□ -0.78
CBX5-202ENST00000439541 CINPQ9BW66 212 aaPredicted RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms