RNA–Protein interactions for RNA: ENST00000417946.5

CPS1-202, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 3

Gene CPS1, Length 699 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-202ENST00000417946 PRPF39Q86UA1 669 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 ADIPOR2Q86V24 386 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 CAND1Q86VP6 1230 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 LRRC49Q8IUZ0 686 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 MFN1Q8IWA4 741 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 SFTPA1Q8IWL2 248 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 CCDC116Q8IYX3 515 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 CARNMT1Q8N4J0 409 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 ZCCHC9Q8N567 271 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 DCAF4L2Q8NA75 395 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 CCNYQ8ND76 341 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 DDI1Q8WTU0 396 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 HNRNPLLQ8WVV9 542 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 IFT81Q8WYA0 676 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 CAVIN3Q969G5 261 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 ELSPBP1Q96BH3 223 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 RIPOR3Q96MK2 946 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 NECTIN4Q96NY8 510 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 BBS2Q9BXC9 721 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 EBF3Q9H4W6 596 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 GLOD4Q9HC38 313 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 LRRC4CQ9HCJ2 640 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 DUS2Q9NX74 493 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 SEPT10Q9P0V9 454 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 PAK5Q9P286 719 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 TBC1D14Q9P2M4 693 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 LHX3Q9UBR4 397 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 FEZ2Q9UHY8 353 aaPredicted RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 HCN2Q9UL51 889 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 TPX2Q9ULW0 747 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 UTP11Q9Y3A2 253 aaKnown RBP6.96□□□□□ -1.3
CPS1-202ENST00000417946 SCN8AQ9UQD0 1980 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 CKAP5Q14008 2032 aa6.96□□□□□ -1.3
CPS1-202ENST00000417946 SHISA7A6NL88 538 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 C2CD4DB7Z1M9 353 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 E7ESA3 106 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 H0Y626 953 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 K7ERQ8 282 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SLC9A3R1O14745 358 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 CHADO15335 359 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MTSS1O43312 755 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SMAD6O43541 496 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 TULP3O75386 442 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SASH3O75995 380 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SUN1O94901 812 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ADH5P11766 374 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ITIH2P19823 946 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 KCNA5P22460 613 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 GBP2P32456 591 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 ADRA1AP35348 466 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 OPRD1P41143 372 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SLC6A11P48066 632 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 OXCT1P55809 520 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 DSC2Q02487 901 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 DHX9Q08211 1270 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 MSLNQ13421 630 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 CDH18Q13634 790 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 HNRNPDQ14103 355 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 FASTKD3Q14CZ7 662 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 MORF4L2Q15014 288 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 PDGFRLQ15198 375 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 CCDC85BQ15834 202 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 GEN1Q17RS7 908 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 PARP6Q2NL67 630 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ZNF800Q2TB10 664 aaPredicted RBP eCLIP6.95□□□□□ -1.3
CPS1-202ENST00000417946 FNBP1LQ5T0N5 605 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SYCP2LQ5T4T6 812 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 DENND5AQ6IQ26 1287 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 CCDC70Q6NSX1 233 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 TIGD7Q6NT04 549 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 EMBQ6PCB8 327 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 LINGO4Q6UY18 593 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ARHGEF18Q6ZSZ5 1173 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 TMC3Q7Z5M5 1100 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 HOOK3Q86VS8 718 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 IGDCC3Q8IVU1 814 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MFSD6LQ8IWD5 586 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 PPIL6Q8IXY8 311 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MREGQ8N565 214 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MEIOBQ8N635 442 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MCUQ8NE86 351 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SPATA22Q8NHS9 363 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 CCHCR1Q8TD31 782 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 EZH1Q92800 747 aaPredicted RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 NXPE3Q969Y0 559 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 TTC17Q96AE7 1141 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 IMP4Q96G21 291 aaKnown RBP6.95□□□□□ -1.3
CPS1-202ENST00000417946 MYO19Q96H55 970 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MRGPRX3Q96LB0 322 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 GDAP1L1Q96MZ0 367 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ZNF599Q96NL3 588 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 AGAP3Q96P47 875 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 PSKH2Q96QS6 385 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 FCRL5Q96RD9 977 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 VAT1Q99536 393 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 MGME1Q9BQP7 344 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SPON2Q9BUD6 331 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 FAM129AQ9BZQ8 928 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 SP110Q9HB58 689 aa6.95□□□□□ -1.3
CPS1-202ENST00000417946 ZFP14Q9HCL3 533 aa6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms