RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 LRRC43Q8N309 656 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 MAPK15Q8TD08 544 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 VPS39Q96JC1 886 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 CDRT15Q96T59 188 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 SENP6Q9GZR1 1112 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 CIDEBQ9UHD4 219 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 APPL1Q9UKG1 709 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 PQBP1O60828 265 aaKnown RBP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 GPR32O75388 356 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 MT-ND1P03886 318 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 ITGAXP20702 1163 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 CES1P23141 567 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 GRK2P25098 689 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 WEE1P30291 646 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 ACADSBP45954 432 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 TWF1Q12792 350 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 FUT11Q495W5 492 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 LRRTM3Q86VH5 581 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 NT5DC4Q86YG4 428 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 TTC39CQ8N584 583 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 DQX1Q8TE96 717 aaKnown RBP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 ARNTL2Q8WYA1 636 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 RSPH1Q8WYR4 309 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 EZH1Q92800 747 aaPredicted RBP13.56□□□□□ -0.24
COL6A2-204ENST00000409416 NXNL1Q96CM4 212 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 CNBD2Q96M20 576 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 LRGUKQ96M69 825 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 SORT1Q99523 831 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 ADAMTS10Q9H324 1103 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 NMRAL1Q9HBL8 299 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 PDP2Q9P2J9 529 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 XPR1Q9UBH6 696 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 DNAJB4Q9UDY4 337 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 KCNH4Q9UQ05 1017 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 CDY1Q9Y6F8 540 aa13.56□□□□□ -0.24
COL6A2-204ENST00000409416 MYOCOSA0A1B0GUC4 107 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 AOC1P19801 751 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 SERPINB8P50452 374 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 DSC2Q02487 901 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 PRKCZQ05513 592 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 KCNA10Q16322 511 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CLEC6AQ6EIG7 209 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 C4orf22Q6V702 233 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 C14orf80Q86SX3 495 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 URGCPQ8TCY9 931 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 PPP2R3CQ969Q6 453 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CENPKQ9BS16 269 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 LRRC40Q9H9A6 602 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CBX4O00257 560 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 AHCYL1O43865 530 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 PRKAR2AP13861 404 aaKnown RBP13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CCND3P30281 292 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-204ENST00000409416 KLF10Q13118 480 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CCNIQ14094 377 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 POM121L1PQ3SYA9 428 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CTXN3Q4LDR2 81 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 TMEM259Q4ZIN3 620 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 IYDQ6PHW0 289 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 TAS2R42Q7RTR8 314 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 UPF1Q92900 1129 aaKnown RBP eCLIP13.55□□□□□ -0.24
COL6A2-204ENST00000409416 IFT43Q96FT9 208 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 FAM210AQ96ND0 272 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 NPAS2Q99743 824 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CLIC5Q9NZA1 410 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 AURKCQ9UQB9 309 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 DTNAQ9Y4J8 743 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CNTN5O94779 1100 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 PCSK1P29120 753 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CPOXP36551 454 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 PTPN9P43378 593 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 FLOT2Q14254 428 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 GLB1LQ6UWU2 654 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 LCA5Q86VQ0 697 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 CASP10Q92851 521 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 FBXO32Q969P5 355 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 MS4A4AQ96JQ5 239 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 SLC39A3Q9BRY0 314 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 ILKAPQ9H0C8 392 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-204ENST00000409416 VCX3BQ9H321 246 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 ALG9Q9H6U8 611 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 RMI1Q9H9A7 625 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 COPS7BQ9H9Q2 264 aaPredicted RBP13.55□□□□□ -0.24
COL6A2-204ENST00000409416 FZD10Q9ULW2 581 aa13.55□□□□□ -0.24
COL6A2-204ENST00000409416 J3KR12 359 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 TRIM13O60858 407 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 GFAPP14136 432 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 MRPS6P82932 125 aaKnown RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 NIPAL4Q0D2K0 466 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 ANKRD20A4Q4UJ75 823 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 LRRC73Q5JTD7 316 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 GATA6Q92908 595 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 ATP6V1E2Q96A05 226 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 RCN3Q96D15 328 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 CPNE1Q99829 537 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 GATA5Q9BWX5 397 aaPredicted RBP13.54□□□□□ -0.24
COL6A2-204ENST00000409416 TM6SF2Q9BZW4 377 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 VRTNQ9H8Y1 702 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 THEGQ9P2T0 379 aa13.54□□□□□ -0.24
COL6A2-204ENST00000409416 ASCC3Q8N3C0 2202 aaKnown RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms