RNA–Protein interactions for RNA: ENST00000337339.6

MSL3-202, Transcript of MSL complex subunit 3, humanhuman

TSL 2 BASIC

Gene MSL3, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSL3-202ENST00000337339 ZNF789Q5FWF6 425 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 RBM20Q5T481 1227 aaKnown RBP9.84□□□□□ -0.83
MSL3-202ENST00000337339 MARC1Q5VT66 337 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 FAM171A1Q5VUB5 890 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 RAB3IL1Q8TBN0 382 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 GIPC2Q8TF65 315 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 EXOC2Q96KP1 924 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 SENP6Q9GZR1 1112 aaPredicted RBP9.84□□□□□ -0.83
MSL3-202ENST00000337339 RHOJQ9H4E5 214 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 GPAMQ9HCL2 828 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 PCDHB12Q9Y5F1 795 aa9.84□□□□□ -0.83
MSL3-202ENST00000337339 BRCA1P38398 1863 aaKnown RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 SIP14410 1827 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 UBA6A0AVT1 1052 aaPredicted RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 G3V2L1 256 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 STX16-NPEPL1H3BU86 382 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 TSPAN3O60637 253 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 MAGEC1O60732 1142 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CCDC166P0CW27 439 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 GABRB3P28472 473 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CDK7P50613 346 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 TBX4P57082 545 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 ACTR3P61158 418 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 DSC2Q02487 901 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 UGP2Q16851 508 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 LSM12Q3MHD2 195 aaKnown RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 NET1Q7Z628 596 aaPredicted RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 PSMG2Q969U7 264 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 POMKQ9H5K3 350 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 MKS1Q9NXB0 559 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 RRN3Q9NYV6 651 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 KCTD3Q9Y597 815 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 HS3ST4Q9Y661 456 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 A0A088AWK7 358 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 SLC12A8A0AV02 714 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 GJB3O75712 270 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 SUPT7LO94864 414 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 RAG1P15918 1043 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CCND3P30281 292 aaPredicted RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 CD151P48509 253 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 GEMP55040 296 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CDH13P55290 713 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 RAB10P61026 200 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 FKBP1BP68106 108 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 PRKCZQ05513 592 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 SEMA3BQ13214 749 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 NAB1Q13506 487 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CTXN3Q4LDR2 81 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CYS1Q717R9 158 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 KBTBD2Q8IY47 623 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 PCDH20Q8N6Y1 951 aaKnown RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 OR52K2Q8NGK3 314 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 FBXO32Q969P5 355 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 RCN3Q96D15 328 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 HMCESQ96FZ2 354 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 ZNF419Q96HQ0 510 aaPredicted RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 MMADHCQ9H3L0 296 aaPredicted RBP9.83□□□□□ -0.84
MSL3-202ENST00000337339 GMIPQ9P107 970 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 DNAJB4Q9UDY4 337 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CDH22Q9UJ99 828 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 CDYLQ9Y232 598 aa9.83□□□□□ -0.84
MSL3-202ENST00000337339 A0A0U1RQF3 1178 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MANSC4A6NHS7 340 aaPredicted RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 HDAC3O15379 428 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 SLC35E2BP0CK96 405 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 HAPLN1P10915 354 aaPredicted RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 PRKAR2AP13861 404 aaKnown RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 CTGFP29279 349 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 PMLP29590 882 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 AIF1P55008 147 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 POLE2P56282 527 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 SCAPQ12770 1279 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 BLMHQ13867 455 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 TBCCQ15814 346 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 ALFQ53S48 1182 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 RNF220Q5VTB9 566 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 LIPMQ5VYY2 423 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 LRRC8EQ6NSJ5 796 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 IFNL1Q8IU54 200 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 HEXDCQ8WVB3 486 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 SOCS4Q8WXH5 440 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 HDAC10Q969S8 669 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 IFT43Q96FT9 208 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 IL1RL2Q9HB29 575 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 OXSMQ9NWU1 459 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 LRCH1Q9Y2L9 728 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 COMMD10Q9Y6G5 202 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MATN3O15232 486 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 DLX3O60479 287 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MAFKO60675 156 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 AOC1P19801 751 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 OR1E1P30953 314 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MRPS22P82650 360 aaKnown RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 DSG1Q02413 1049 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 LPIN1Q14693 890 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 MAPRE1Q15691 268 aaKnown RBP9.82□□□□□ -0.84
MSL3-202ENST00000337339 RAB41Q5JT25 222 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 KCTD11Q693B1 232 aa9.82□□□□□ -0.84
MSL3-202ENST00000337339 SERINC5Q86VE9 423 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms