RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 SLC12A2P55011 1212 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 GJA9P57773 515 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 PDAP1Q13442 181 aaKnown RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 KRT80Q6KB66 452 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 CHSY3Q70JA7 882 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 TOP6BLQ8N6T0 577 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 HM13Q8TCT9 377 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 EMID1Q96A84 441 aaPredicted RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 PDGFDQ9GZP0 370 aaPredicted RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 PDGFCQ9NRA1 345 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 GALNT8Q9NY28 637 aa14.02□□□□□ -0.17
MKS1-201ENST00000313863 IPO11Q9UI26 975 aaKnown RBP14.02□□□□□ -0.17
MKS1-201ENST00000313863 OTOFQ9HC10 1997 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 HNRNPRO43390 633 aaKnown RBP14.01□□□□□ -0.17
MKS1-201ENST00000313863 PFDN1O60925 122 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 YBX3P16989 372 aaKnown RBP eCLIP14.01□□□□□ -0.179e-6■□□□□ 10.4
MKS1-201ENST00000313863 PAMP19021 973 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 CDH2P19022 906 aaPredicted RBP14.01□□□□□ -0.17
MKS1-201ENST00000313863 SLC7A1P30825 629 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 TKTL1P51854 596 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 GRIK4Q16099 956 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 DGKDQ16760 1214 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 SAMD4BQ5PRF9 694 aaKnown RBP14.01□□□□□ -0.17
MKS1-201ENST00000313863 IL23RQ5VWK5 629 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 PKN3Q6P5Z2 889 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 HACD2Q6Y1H2 254 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 SLC41A1Q8IVJ1 513 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 CENPLQ8N0S6 344 aaPredicted RBP14.01□□□□□ -0.17
MKS1-201ENST00000313863 PELI3Q8N2H9 469 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 RNF148Q8N7C7 305 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 PPHLN1Q8NEY8 458 aaKnown RBP14.01□□□□□ -0.17
MKS1-201ENST00000313863 TRPV6Q9H1D0 765 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 UPF3AQ9H1J1 476 aaKnown RBP14.01□□□□□ -0.17
MKS1-201ENST00000313863 VTA1Q9NP79 307 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 TMPRSS4Q9NRS4 437 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 GTSE1Q9NYZ3 720 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 FBXW11Q9UKB1 542 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 PCDHGA7Q9Y5G6 932 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 CEPT1Q9Y6K0 416 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 NUP205Q92621 2012 aa14.01□□□□□ -0.17
MKS1-201ENST00000313863 FAM95CA0A1B0GW59 222 aa14□□□□□ -0.17
MKS1-201ENST00000313863 HCRTO43612 131 aa14□□□□□ -0.17
MKS1-201ENST00000313863 ANXA9O76027 345 aa14□□□□□ -0.17
MKS1-201ENST00000313863 AXLP30530 894 aa14□□□□□ -0.17
MKS1-201ENST00000313863 MSX2P35548 267 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 CDK9P50750 372 aaKnown RBP14□□□□□ -0.17
MKS1-201ENST00000313863 PITX1P78337 314 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 ITGA7Q13683 1181 aa14□□□□□ -0.17
MKS1-201ENST00000313863 IKBKEQ14164 716 aa14□□□□□ -0.17
MKS1-201ENST00000313863 KLHDC8BQ8IXV7 354 aa14□□□□□ -0.17
MKS1-201ENST00000313863 NUP93Q8N1F7 819 aa14□□□□□ -0.17
MKS1-201ENST00000313863 KLHL23Q8NBE8 558 aa14□□□□□ -0.17
MKS1-201ENST00000313863 ACVR1CQ8NER5 493 aa14□□□□□ -0.17
MKS1-201ENST00000313863 PGAP3Q96FM1 320 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 BIRC8Q96P09 236 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TSGA13Q96PP4 275 aa14□□□□□ -0.17
MKS1-201ENST00000313863 UHRF1Q96T88 793 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 SLC25A23Q9BV35 468 aa14□□□□□ -0.17
MKS1-201ENST00000313863 FTHL17Q9BXU8 183 aa14□□□□□ -0.17
MKS1-201ENST00000313863 PREBQ9HCU5 417 aa14□□□□□ -0.17
MKS1-201ENST00000313863 SPAG4Q9NPE6 437 aa14□□□□□ -0.17
MKS1-201ENST00000313863 DDX18Q9NVP1 670 aaKnown RBP14□□□□□ -0.17
MKS1-201ENST00000313863 HSFX1Q9UBD0 423 aa14□□□□□ -0.17
MKS1-201ENST00000313863 NRCAMQ92823 1304 aa14□□□□□ -0.17
MKS1-201ENST00000313863 PAPPA2Q9BXP8 1791 aa14□□□□□ -0.17
MKS1-201ENST00000313863 H3BRB1 525 aa14□□□□□ -0.17
MKS1-201ENST00000313863 STX16-NPEPL1H3BU86 382 aa14□□□□□ -0.17
MKS1-201ENST00000313863 PSMD12O00232 456 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 CXCL11O14625 94 aa14□□□□□ -0.17
MKS1-201ENST00000313863 RECQL4O94761 1208 aa14□□□□□ -0.17
MKS1-201ENST00000313863 AHSGP02765 367 aa14□□□□□ -0.17
MKS1-201ENST00000313863 CDK4P11802 303 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TPH1P17752 444 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TKTP29401 623 aaKnown RBP14□□□□□ -0.17
MKS1-201ENST00000313863 HOXA11P31270 313 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 CCR10P46092 362 aa14□□□□□ -0.17
MKS1-201ENST00000313863 ALDH3B2P48448 385 aa14□□□□□ -0.17
MKS1-201ENST00000313863 POU4F1Q01851 419 aa14□□□□□ -0.17
MKS1-201ENST00000313863 ZBTB17Q13105 803 aa14□□□□□ -0.17
MKS1-201ENST00000313863 SYPL2Q5VXT5 272 aa14□□□□□ -0.17
MKS1-201ENST00000313863 FAM43BQ6ZT52 329 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 AMIGO2Q86SJ2 522 aa14□□□□□ -0.17
MKS1-201ENST00000313863 CARM1Q86X55 608 aa14□□□□□ -0.17
MKS1-201ENST00000313863 CROCCP3Q8IVE0 287 aa14□□□□□ -0.17
MKS1-201ENST00000313863 ADAM32Q8TC27 787 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TRPM4Q8TD43 1214 aa14□□□□□ -0.17
MKS1-201ENST00000313863 NDRG1Q92597 394 aaKnown RBP14□□□□□ -0.17
MKS1-201ENST00000313863 ATP6V1E2Q96A05 226 aa14□□□□□ -0.17
MKS1-201ENST00000313863 RMND5BQ96G75 393 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 MARK4Q96L34 752 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TBL1YQ9BQ87 522 aa14□□□□□ -0.17
MKS1-201ENST00000313863 APOL2Q9BQE5 337 aa14□□□□□ -0.17
MKS1-201ENST00000313863 MED10Q9BTT4 135 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TUT1Q9H6E5 874 aaKnown RBP14□□□□□ -0.17
MKS1-201ENST00000313863 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14□□□□□ -0.17
MKS1-201ENST00000313863 SLC8A2Q9UPR5 921 aa14□□□□□ -0.17
MKS1-201ENST00000313863 HES2Q9Y543 173 aa14□□□□□ -0.17
MKS1-201ENST00000313863 TANC1Q9C0D5 1861 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 TCRBV3S1A0A5B6 114 aa13.99□□□□□ -0.17
MKS1-201ENST00000313863 RRN3P2A6NIE6 340 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms