RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 MMP2P08253 660 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 TYMPP19971 482 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 GRIA4P48058 902 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ARSDP51689 593 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 KCNQ1P51787 676 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 TAF10Q12962 218 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 MAPRE1Q15691 268 aaKnown RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 INSCQ1MX18 579 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ARL13AQ5H913 290 aaPredicted RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 PPM1LQ5SGD2 360 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 TSTD2Q5T7W7 516 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 FBXL22Q6P050 247 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 RANBP10Q6VN20 620 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 RIPOR1Q6ZS17 1223 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ULK2Q8IYT8 1036 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ENDOVQ8N8Q3 282 aaKnown RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 TDRD5Q8NAT2 981 aaKnown RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 HIPK4Q8NE63 616 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 SLC39A13Q96H72 371 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 OLFM1Q99784 485 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 CATSPERBQ9H7T0 1116 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 XPR1Q9UBH6 696 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ZDHHC2Q9UIJ5 367 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 FIS1Q9Y3D6 152 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 TCAF1Q9Y4C2 921 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 FAM95CA0A1B0GW59 222 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 NEBLO76041 1014 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 PSMG1O95456 288 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 PRSS56P0CW18 603 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 KCNA5P22460 613 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 CSRP3P50461 194 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 PLK1P53350 603 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 CLNS1AP54105 237 aaKnown RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 EPHB1P54762 984 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 COG7P83436 770 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 ANO4Q32M45 955 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 MGAT5BQ3V5L5 792 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 FAM26DQ5JW98 314 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 RTP2Q5QGT7 225 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 AFMIDQ63HM1 303 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 PRSS55Q6UWB4 352 aaPredicted RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 FRMD7Q6ZUT3 714 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 PTAR1Q7Z6K3 402 aaPredicted RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 TMPRSS6Q8IU80 811 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 DBF4BQ8NFT6 615 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 OR52K2Q8NGK3 314 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 BCL7CQ8WUZ0 217 aaPredicted RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 CCDC124Q96CT7 223 aaKnown RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 ELMO2Q96JJ3 720 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 NUF2Q9BZD4 464 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 RHOJQ9H4E5 214 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 CYP4F12Q9HCS2 524 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 TNFRSF12AQ9NP84 129 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 OXSMQ9NWU1 459 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 AAR2Q9Y312 384 aaKnown RBP11.92□□□□□ -0.5
RHO-201ENST00000296271 PCDHB12Q9Y5F1 795 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 FRMPD3Q5JV73 1810 aa11.92□□□□□ -0.5
RHO-201ENST00000296271 MIA3Q5JRA6 1907 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 A0A088AWK7 358 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 A0A0U1RQS6 177 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 DLX3O60479 287 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 TRIM13O60858 407 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 NBNO60934 754 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 PIGNO95427 931 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SERPINB5P36952 375 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 NKX3-2P78367 333 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 DUSP4Q13115 394 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 CCDC153Q494R4 210 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 C10orf120Q5SQS8 335 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 FAM91A1Q658Y4 838 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 KDELC1Q6UW63 502 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 MON1AQ86VX9 555 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SCUBE1Q8IWY4 988 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 LSMEM2Q8N112 164 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SCML4Q8N228 414 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 CCNYL1Q8N7R7 359 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SNX31Q8N9S9 440 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 FBXO32Q969P5 355 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 NSMCE3Q96MG7 304 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 UROC1Q96N76 676 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 GPR78Q96P69 363 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 CDH19Q9H159 772 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 MARCH4Q9P2E8 410 aaPredicted RBP11.91□□□□□ -0.5
RHO-201ENST00000296271 TLK1Q9UKI8 766 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 ADAM28Q9UKQ2 775 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SCML2Q9UQR0 700 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 SLC12A8A0AV02 714 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 MAGEB16A2A368 324 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 TIMM44O43615 452 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 TRPA1O75762 1119 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 MPOP05164 745 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 HNRNPLP14866 589 aaKnown RBP eCLIP11.91□□□□□ -0.5
RHO-201ENST00000296271 CPB1P15086 417 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 GRK2P25098 689 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 MSX2P35548 267 aaPredicted RBP11.91□□□□□ -0.5
RHO-201ENST00000296271 CSE1LP55060 971 aaKnown RBP11.91□□□□□ -0.5
RHO-201ENST00000296271 SP3Q02447 781 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 NAA25Q14CX7 972 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 PTPRRQ15256 657 aa11.91□□□□□ -0.5
RHO-201ENST00000296271 RNF180Q86T96 592 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms