RNA–Protein interactions for RNA: ENST00000266679.8

CPSF6-201, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 1 (best) BASIC

Gene CPSF6, Length 2,229 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-201ENST00000266679 PDHA1P08559 390 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ACADSP16219 412 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 GABRB3P28472 473 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 MAGEA10P43363 369 aaPredicted RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 YWHAHQ04917 246 aaPredicted RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 CTBP1Q13363 440 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ITGA7Q13683 1181 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 RALGPS1Q5JS13 557 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 DENND5AQ6IQ26 1287 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ZYG11AQ6WRX3 759 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 BEND5Q7L4P6 421 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 PHTF2Q8N3S3 785 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 MAPK15Q8TD08 544 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 SCG3Q8WXD2 468 aaKnown RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 PPP1R36Q96LQ0 422 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 FSD1LQ9BXM9 530 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 CYP4F11Q9HBI6 524 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 TRMT13Q9NUP7 481 aaKnown RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 RBM22Q9NW64 420 aaKnown RBP eCLIP13.07□□□□□ -0.321e-9■□□□□ 8.7
CPSF6-201ENST00000266679 OXSMQ9NWU1 459 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 MID2Q9UJV3 735 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 NOD1Q9Y239 953 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 TCAF1Q9Y4C2 921 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 A0A0C4DFX4 3053 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 BPTFQ12830 3046 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 PLXNA3P51805 1871 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 A0A088AWK7 358 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 F8W8V4 182 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 DCXO43602 365 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ZMPSTE24O75844 475 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 AHSGP02765 367 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 SLC35E2BP0CK96 405 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 GCKP35557 465 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 HADHAP40939 763 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 GPR15P49685 360 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 PAPOLAP51003 745 aaKnown RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 CUL3Q13618 768 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 PCSK7Q16549 785 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 NOMO2Q5JPE7 1267 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ARTNQ5T4W7 220 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 EPGNQ6UW88 154 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 MFSD6LQ8IWD5 586 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 FTHL17Q9BXU8 183 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 OSBPL1AQ9BXW6 950 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 UNKQ9C0B0 810 aaKnown RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 OSER1Q9NX31 292 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 ANGPTL2Q9UKU9 493 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 PCDHB8Q9UN66 801 aa13.07□□□□□ -0.32
CPSF6-201ENST00000266679 RUVBL2Q9Y230 463 aaKnown RBP13.07□□□□□ -0.32
CPSF6-201ENST00000266679 UNC80Q8N2C7 3258 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 GOLGA8QA0A0J9YX86 632 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 FAM95CA0A1B0GW59 222 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 GOLGA8OA6NCC3 632 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 GOLGA8NF8WBI6 632 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 NEMP1O14524 444 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 ZBTB14O43829 449 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 PDE5AO76074 875 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 APOA4P06727 396 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 MYL4P12829 197 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 TYMPP19971 482 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 DNAJB2P25686 324 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 SLC1A2P43004 574 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 GRIA4P48058 902 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 CSRP3P50461 194 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 EPHB1P54762 984 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 ACTR3P61158 418 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 SLC12A1Q13621 1099 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 CMPK2Q5EBM0 449 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 LIPMQ5VYY2 423 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 LRRC8EQ6NSJ5 796 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 MYLK4Q86YV6 388 aaPredicted RBP13.06□□□□□ -0.32
CPSF6-201ENST00000266679 LMNTD2Q8IXW0 634 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 LZTR1Q8N653 840 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 RTL3Q8N8U3 475 aaKnown RBP13.06□□□□□ -0.32
CPSF6-201ENST00000266679 MIEF2Q96C03 454 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 LRCH3Q96II8 777 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 OR52B2Q96RD2 323 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 GDF15Q99988 308 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF212Q9UDV6 495 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 ATP11BQ9Y2G3 1177 aa13.06□□□□□ -0.32
CPSF6-201ENST00000266679 RPLP2P05387 115 aaKnown RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 SBK3P0C264 359 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ANPEPP15144 967 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ARNTP27540 789 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 HTR7P34969 479 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ADRA1AP35348 466 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 BLMHQ13867 455 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ANO7Q6IWH7 933 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 TIGD7Q6NT04 549 aaPredicted RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ZNF280BQ86YH2 543 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 CENPLQ8N0S6 344 aaPredicted RBP13.05□□□□□ -0.32
CPSF6-201ENST00000266679 SPATA6LQ8N4H0 392 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 PPFIBP2Q8ND30 876 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 MICAL1Q8TDZ2 1067 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ELMO2Q96JJ3 720 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 MRGPRX2Q96LB1 330 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 TRPV6Q9H1D0 765 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 LOC100653049A0A140TA62 436 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 ARHGEF37A1IGU5 675 aa13.05□□□□□ -0.32
CPSF6-201ENST00000266679 MAP3K7O43318 606 aa13.05□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms