RNA–Protein interactions for RNA: ENST00000244020.4

SRSF6-201, Transcript of serine and arginine rich splicing factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRSF6, Length 4,325 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF6-201ENST00000244020 OR8H2Q8N162 312 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TMEM130Q8N3G9 435 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CBR4Q8N4T8 237 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FBXL8Q96CD0 374 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ZNF597Q96LX8 424 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ACO2Q99798 780 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 NT5C1AQ9BXI3 368 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 MAGEB5Q9BZ81 275 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 OLAHQ9NV23 265 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 OXSMQ9NWU1 459 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 VANGL2Q9ULK5 521 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FAM149AA5PLN7 773 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TMEM221A6NGB7 291 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CLOCKO15516 846 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 SRP72O76094 671 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 LCP1P13796 627 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 GOT1P17174 413 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 DPP6P42658 865 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 OLIG2Q13516 323 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 RGS21Q2M5E4 152 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 C1QTNF12Q5T7M4 302 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 EGFLAMQ63HQ2 1017 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 GPR180Q86V85 440 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TTC30AQ86WT1 665 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TICAM1Q8IUC6 712 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 SPATA6LQ8N4H0 392 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FIBCD1Q8N539 461 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 PHF21AQ96BD5 680 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 B3GNT5Q9BYG0 378 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 SPAG4Q9NPE6 437 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CPSF3Q9UKF6 684 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ADAM28Q9UKQ2 775 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 SPATA2Q9UM82 520 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 GREB1LQ9C091 1923 aaPredicted RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FUOMA2VDF0 154 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 G3V2L1 256 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 PARNO95453 639 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 NFICP08651 508 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TPH1P17752 444 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 HALP42357 657 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 ALDH3B2P48448 385 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 LIMK2P53671 638 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FKBP1AP62942 108 aaKnown RBP9.37□□□□□ -0.91
SRSF6-201ENST00000244020 DMC1Q14565 340 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 TRNP1Q6NT89 227 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 MPZL3Q6UWV2 235 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 EEPD1Q7L9B9 569 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 FAM131BQ86XD5 332 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 SNX31Q8N9S9 440 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 P2RY11Q96G91 374 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 QKIQ96PU8 341 aaKnown RBP eCLIP9.37□□□□□ -0.913e-15■□□□□ 8.1
SRSF6-201ENST00000244020 TRIM15Q9C019 465 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 DTLQ9NZJ0 730 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 HES2Q9Y543 173 aa9.37□□□□□ -0.91
SRSF6-201ENST00000244020 CROCCQ5TZA2 2017 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 TMEM233B4DJY2 109 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 MRASO14807 208 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CILPO75339 1184 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 HOXC6P09630 235 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 FOSL2P15408 326 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 ADSLP30566 484 aaPredicted RBP9.36□□□□□ -0.91
SRSF6-201ENST00000244020 PGGT1BP53609 377 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 SLC6A3Q01959 620 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 GRM1Q13255 1194 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CAPRIN1Q14444 709 aaKnown RBP9.36□□□□□ -0.91
SRSF6-201ENST00000244020 STXBP2Q15833 593 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 FAM160B1Q5W0V3 765 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 KCNMB4Q86W47 210 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CENPSQ8N2Z9 138 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 TRIM63Q969Q1 353 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 VPS39Q96JC1 886 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CSPG4P5Q96PW8 444 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 TCF12Q99081 682 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 MTG1Q9BT17 334 aaPredicted RBP9.36□□□□□ -0.91
SRSF6-201ENST00000244020 YIPF2Q9BWQ6 316 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CHID1Q9BWS9 393 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 VPS28Q9UK41 221 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CROTQ9UKG9 612 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 KLHL20Q9Y2M5 609 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 SNX9Q9Y5X1 595 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 K7EPI3 171 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 PLOD2O00469 737 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 UBDO15205 165 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 TOMM70O94826 608 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 BMP10O95393 424 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 SLC7A1P30825 629 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 LAMTOR4Q0VGL1 99 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 NME3Q13232 169 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 BFSP2Q13515 415 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 USP41Q3LFD5 358 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 PITRM1Q5JRX3 1037 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 STEAP4Q687X5 459 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 RWDD4Q6NW29 188 aaKnown RBP9.36□□□□□ -0.91
SRSF6-201ENST00000244020 ACOT1Q86TX2 421 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 CARM1Q86X55 608 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 NLGN1Q8N2Q7 840 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 UBASH3BQ8TF42 649 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 GIPC2Q8TF65 315 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 KCTD4Q8WVF5 259 aa9.36□□□□□ -0.91
SRSF6-201ENST00000244020 MFSD3Q96ES6 412 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms