RNA–Protein interactions for RNA: ENST00000225964.9

COL1A1-201, Transcript of collagen type I alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL1A1, Length 6,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-201ENST00000225964 SMYD1Q8NB12 490 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 HJURPQ8NCD3 748 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 OR6Y1Q8NGX8 325 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 VAT1Q99536 393 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 NR2F1P10589 423 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 WARSP23381 471 aaKnown RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 TBX2Q13207 712 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 AP5B1Q2VPB7 878 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 ARMC8Q8IUR7 673 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 NEK7Q8TDX7 302 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 NELL1Q92832 810 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 NDNQ99608 321 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 RXFP1Q9HBX9 757 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 VPS4AQ9UN37 437 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 SLC27A6Q9Y2P4 619 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 RBM7Q9Y580 266 aaKnown RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 LTA4HP09960 611 aaKnown RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 TRAF3Q13114 568 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 SEC23AQ15436 765 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 MAPK11Q15759 364 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 C16orf46Q6P387 395 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 CATSPERGQ6ZRH7 1159 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 POU5F2Q8N7G0 328 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 MYCBPAPQ8TBZ2 947 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 ATL1Q8WXF7 558 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 IL25Q9H293 177 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 ATP9AO75110 1047 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 BCL10O95999 233 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 CCNYL3P0C7X3 344 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 SNX32Q86XE0 403 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 CPA6Q8N4T0 437 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 RORBQ92753 470 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 DDX4Q9NQI0 724 aaKnown RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 ARHGAP20Q9P2F6 1191 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 FRMPD4Q14CM0 1322 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 CACNB4O00305 520 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 PDE2AO00408 941 aaPredicted RBP13.37□□□□□ -0.27
COL1A1-201ENST00000225964 GCATO75600 419 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 PEX6Q13608 980 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 CNPPD1Q9BV87 410 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 PORCNQ9H237 461 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 NINJ2Q9NZG7 142 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 ANGPT4Q9Y264 503 aa13.37□□□□□ -0.27
COL1A1-201ENST00000225964 NT5C1B-RDH14C9J2C7 533 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 SLC35G4P0C7Q5 338 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 PECAM1P16284 738 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ITGA1P56199 1179 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 FRG1Q14331 258 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 VCPIP1Q96JH7 1222 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 IL22Q9GZX6 179 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 TMEM134Q9H6X4 195 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 KIF1CO43896 1103 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 SCN2BO60939 215 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 KDELR1P24390 212 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ACAP1Q15027 740 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 TARBP2Q15633 366 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 LRRC39Q96DD0 335 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ABHD14A-ACY1A0A1B0GW23 586 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 CCDC166P0CW27 439 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 CCNB1P14635 433 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 TMEM119Q4V9L6 283 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF248Q8NDW4 579 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ABCG8Q9H221 673 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ZFP14Q9HCL3 533 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 CHKBQ9Y259 395 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 PPRC1Q5VV67 1664 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 EML1O00423 815 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 CLDN5O00501 218 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 PRLRP16471 622 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 KIAA0408Q6ZU52 694 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 OR4A15Q8NGL6 344 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 DEFB118Q96PH6 123 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 SEMA4AQ9H3S1 761 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 TMEM51Q9NW97 253 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 SALL1Q9NSC2 1324 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 SLC15A5A6NIM6 579 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 SLC28A1O00337 649 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 CLOCKO15516 846 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 KHDRBS3O75525 346 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 FARP2O94887 1054 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 TRUB2O95900 331 aaKnown RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 MYBL2P10244 700 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ZNF135P52742 658 aaPredicted RBP13.36□□□□□ -0.27
COL1A1-201ENST00000225964 MAP2K5Q13163 448 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 ZFPM1Q8IX07 1006 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 STAG3L4Q8TBR4 150 aa13.36□□□□□ -0.27
COL1A1-201ENST00000225964 UBOX5O94941 541 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 GCNT1Q02742 428 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 TSC22D1Q15714 1073 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 INTS11Q5TA45 600 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 EXOC2Q96KP1 924 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 TEKT5Q96M29 485 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 TISP43B9A030 160 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 APODP05090 189 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PCCBP05166 539 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 HNRNPH1P31943 449 aaKnown RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 TTPAP49638 278 aa13.35□□□□□ -0.27
COL1A1-201ENST00000225964 PSRC1Q6PGN9 363 aaPredicted RBP13.35□□□□□ -0.27
COL1A1-201ENST00000225964 NKAPQ8N5F7 415 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms