RNA–Protein interactions for RNA: ENSMUST00000095476.5

Lig4-201, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 5,028 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-201ENSMUST00000095476 4930503E14RikQ9D583 177 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Ift22Q9DAI2 185 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Slc7a8Q9QXW9 531 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Parp14Q2EMV9 1817 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm2956E9PVJ0 216 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm5796E9Q7M8 205 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm3629K7N6Y2 205 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm10340K7N708 205 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm8108K7N734 216 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gli1P47806 1111 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Cyp2j13Q3UNV4 503 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Kiaa1841Q68FF0 718 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Scaf8Q6DID3 1268 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Abhd10Q6PE15 297 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Tmem121Q80XA0 318 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 SpidrQ8BGX7 933 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Ints6lQ8BND4 861 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 TiparpQ8C1B2 657 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Pih1d2Q8CHR9 315 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Depdc1aQ8CIG0 804 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Cadm1Q8R5M8 456 aaKnown RBP10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Elovl6Q920L5 267 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Prmt3Q922H1 532 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Ska1Q9CPV1 254 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Kat8Q9D1P2 458 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Ssr3Q9DCF9 185 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Il22bQ9JJY8 179 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Rps6kb2Q9Z1M4 485 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 DnmbpQ6TXD4 1580 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f15A0A087WR44 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f12A0A0A0MQP3 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm13040A2A8C4 496 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Vmn1r3A2AMT7 306 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm13101A2ASJ0 481 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f9A2BFZ7 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f7A2BHG6 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f19A2CG71 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f10A2CG92 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f3A2CGC2 496 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gm13119B1ARV5 481 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f13B8JKF6 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Ccdc8D3YZV8 685 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f2J3QMS5 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f25J3QMV9 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f6J3QMW9 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f26J3QNK2 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f24J3QNQ5 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f8J3QQ50 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f17L7MU81 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f18L7MU83 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Htr5bP31387 370 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 FshrP35378 692 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gbx2P48031 348 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 CtshP49935 333 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Cdc42P60766 191 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Gng2P63213 71 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Nkx2-3P97334 362 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Kcnc2Q14B80 642 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f14Q1LZI5 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Btbd35f27Q5FWA1 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Lcp1Q61233 627 aaKnown RBP10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Suz12Q80U70 741 aaKnown RBP10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Slc41a1Q8BJA2 512 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Slc18a2Q8BRU6 517 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Trub1Q8C0D0 338 aaKnown RBP10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Q8CC96 669 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Vmn1r79Q8R285 306 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Olfr397Q8VEZ6 315 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Isoc1Q91V64 297 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 GMCL1P1Q99N64 498 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Mrpl19Q9D338 292 aaKnown RBP10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 TtpalQ9D3D0 343 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Tmem114Q9D563 222 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Ap3s1Q9DCR2 193 aa10.34□□□□□ -0.75
Lig4-201ENSMUST00000095476 Pnldc1B2RXZ1 531 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Gm5930D3Z257 264 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Gm8906L7N2A2 181 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Gm6614M0QWR8 670 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Atxn2O70305 1285 aaKnown RBP10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Glb1P23780 647 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Plekhf1Q3TB82 279 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Fscn1Q61553 493 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 MelkQ61846 643 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Angptl1Q640P2 490 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Capn3Q64691 821 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Mcph1Q7TT79 822 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 B3galnt2Q8BG28 504 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Serpina3bQ8BYY9 420 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Gm4922Q8C0N0 497 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Rbm4Q8C7Q4 361 aaKnown RBP10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Rbm4bQ8VE92 357 aaKnown RBP10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Lsm12Q9D0R8 195 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Atg7Q9D906 698 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Ndufs3Q9DCT2 263 aaKnown RBP10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Slc15a2Q9ES07 729 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Kdelc1Q9JHP7 502 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Myo5cE9Q1F5 1742 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Chil5A0A0G2JDS2 431 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Gm16440K7N6G6 218 aa10.33□□□□□ -0.76
Lig4-201ENSMUST00000095476 Vmn2r31L7N1Z4 861 aa10.33□□□□□ -0.76
Retrieved 100 of 22,080 RNA–protein pairs in 43.3 ms