RNA–Protein interactions for RNA: ENSMUST00000053440.7

Ccdc40-202, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ccdc40, Length 3,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-202ENSMUST00000053440 Rnft1Q9DCN7 395 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tspan3Q9QY33 253 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tubd1Q9R1K7 455 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Lama3Q61789 3330 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm5751A2AHC8 147 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ssxb8B1AY40 170 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn2r24D3YUI0 854 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Zfp358E9Q8M1 571 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Top3aO70157 1003 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 AldoaP05064 364 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sbk3P0C5K0 361 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ptger1P35375 405 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mtf2Q02395 593 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 AcadsQ07417 412 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyb5r2Q3KNK3 276 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Snx21Q3UR97 363 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr463Q5SW49 311 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr462Q5SW50 311 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 StyxQ60969 223 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Eif4bQ8BGD9 611 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pan2Q8BGF7 1200 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Fam163bQ8BUM6 167 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Atxn7l2Q8C8K6 696 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Aqp12Q8CHJ2 290 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mrpl47Q8K2Y7 252 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pcdha11Q91Y19 950 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 DenrQ9CQJ6 198 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Lrrc46Q9DAP0 323 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn1r2A2AMT6 306 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Slc4a9E9PUP3 929 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nlrp12E9Q5R7 1054 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr292F8VQ84 308 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dsg3O35902 993 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mcpt1P11034 246 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tap2P36371 702 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Kpna2P52293 529 aaKnown RBP9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Psme3P61290 254 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Htr4P97288 388 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 HdxQ14B70 692 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pag1Q3U1F9 429 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Q5XFZ0 217 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyp3a13Q64464 503 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Nqo1Q64669 274 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Scd4Q6T707 353 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Prkaa2Q8BRK8 552 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ppp4r1Q8K2V1 951 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gfm2Q8R2Q4 779 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 ClyblQ8R4N0 338 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Tbc1d22aQ8R5A6 516 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rgs10Q9CQE5 181 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dus2Q9D7B1 493 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Q9D979 236 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Stk19Q9JHN8 254 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Plagl1Q9JLQ4 704 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Egfl7Q9QXT5 275 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Msl3Q9WVG9 525 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cib1Q9Z0F4 191 aa9.91□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rhox3fA2ANE1 215 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sema3aO08665 772 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 P01740 135 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 PtprcP06800 1291 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Stat5aP42230 793 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 CtswP56203 371 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rab10P61027 200 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ldb1P70662 411 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Treml2Q2LA85 329 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trim75Q3UWZ0 467 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr1037Q7TR84 321 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rnf38Q8BI21 518 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sept10Q8C650 452 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Snx9Q91VH2 595 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Rnf31Q924T7 1066 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Mccc1Q99MR8 717 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Znf687Q9D2D7 1237 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 CrotQ9DC50 612 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Il17rbQ9JIP3 499 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Homer2Q9QWW1 354 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Trpc5Q9QX29 975 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 H2afyQ9QZQ8 372 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Morc1Q9WVL5 950 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 ApipQ9WVQ5 241 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cd320Q9Z1P5 260 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Brca1P48754 1812 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm4756A0A140LIS8 335 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Gm14401A2ARV7 303 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Olfr1049A2ARZ0 308 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Dennd5bA2RSQ0 1274 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 JhyE9Q793 770 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Vmn2r65G3X931 845 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Grip2G3XA20 1042 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Psmc3O88685 442 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Lamp1P11438 406 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Cyp2b10P12791 500 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Pld2P97813 933 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ptcd3Q14C51 685 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Q32M26 199 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Ntrk1Q3UFB7 799 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Arhgap17Q3UIA2 846 aa9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Sorbs2Q3UTJ2 1180 aaKnown RBP9.9□□□□□ -0.82
Ccdc40-202ENSMUST00000053440 Akap14Q3V0I7 536 aa9.9□□□□□ -0.82
Retrieved 100 of 22,080 RNA–protein pairs in 42.4 ms