RNA–Protein interactions for RNA: ENST00000642021.1

PHGDH-233, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,794 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-233ENST00000642021 LSAMPQ13449 338 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 SV2CQ496J9 727 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 XKR4Q5GH76 650 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 PDZD4Q76G19 769 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 TICAM1Q8IUC6 712 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 SHCBP1Q8NEM2 672 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 NXNL1Q96CM4 212 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 NMD3Q96D46 503 aaKnown RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 ZFP42Q96MM3 310 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 KLHL32Q96NJ5 620 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 GPR78Q96P69 363 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 NPAS2Q99743 824 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 PKP2Q99959 881 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 COLEC11Q9BWP8 271 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 RHOJQ9H4E5 214 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 XPR1Q9UBH6 696 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 OR12D3Q9UGF7 316 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 TIMM13Q9Y5L4 95 aaPredicted RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 AK5Q9Y6K8 562 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 CEP350Q5VT06 3117 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 TCAF2A6NFQ2 919 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 ERI2A8K979 691 aaKnown RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 H2AFYO75367 372 aaKnown RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 DDHD2O94830 711 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 LRIG2O94898 1065 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 CRTAMO95727 393 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 RPS6KA3P51812 740 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 PRKAA1Q13131 559 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 TBC1D25Q3MII6 688 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 ZNF280DQ6N043 979 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 PAOXQ6QHF9 649 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 FASTKD5Q7L8L6 764 aaKnown RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 KDM1BQ8NB78 822 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 OR6J1Q8NGC5 347 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 SGF29Q96ES7 293 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 SERPINI1Q99574 410 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 KIFC1Q9BW19 673 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 WDR41Q9HAD4 459 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 ZBTB26Q9HCK0 441 aa14.03□□□□□ -0.16
PHGDH-233ENST00000642021 COPG1Q9Y678 874 aaKnown RBP14.03□□□□□ -0.16
PHGDH-233ENST00000642021 MYBPHLA2RUH7 354 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 CYP2C9P11712 490 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 CDKL1Q00532 357 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 CDH17Q12864 832 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 ADGRE1Q14246 886 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 CNGA3Q16281 694 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 DGKDQ16760 1214 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 DUSP28Q4G0W2 176 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 CCNYL1Q8N7R7 359 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 SMG8Q8ND04 991 aaKnown RBP14.02□□□□□ -0.16
PHGDH-233ENST00000642021 GPRC5AQ8NFJ5 357 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 LRGUKQ96M69 825 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 NDNQ99608 321 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 TKTL2Q9H0I9 626 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 TRHDEQ9UKU6 1024 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 CDYLQ9Y232 598 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 SLC4A7Q9Y6M7 1214 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 COMMD3-BMI1R4GMX3 469 aa14.02□□□□□ -0.16
PHGDH-233ENST00000642021 SBF1O95248 1867 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 NEMP2A6NFY4 417 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 MEIS3P2A8K0S8 358 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 PTGESO14684 152 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 GABRDO14764 452 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 NCAM2O15394 837 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 VAPBO95292 243 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 FAM200BP0CF97 657 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 SMIM10L2AP0DMW4 78 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 SMIM10L2BP0DMW5 78 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 HOXD8P13378 290 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-233ENST00000642021 HCAR3P49019 387 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 POU6F1Q14863 301 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 SNX17Q15036 470 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 LRRC8EQ6NSJ5 796 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 ESRP1Q6NXG1 681 aaKnown RBP14.02□□□□□ -0.17
PHGDH-233ENST00000642021 PGAM4Q8N0Y7 254 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 METTL25Q8N6Q8 603 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 TOP6BLQ8N6T0 577 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 PNPLA1Q8N8W4 532 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 PRICKLE1Q96MT3 831 aaPredicted RBP14.02□□□□□ -0.17
PHGDH-233ENST00000642021 RHOBTB2Q9BYZ6 727 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 ADARB2Q9NS39 739 aaKnown RBP14.02□□□□□ -0.17
PHGDH-233ENST00000642021 SLC2A6Q9UGQ3 507 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 VPS28Q9UK41 221 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 APPL1Q9UKG1 709 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 LZTS1Q9Y250 596 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 IPPQ9Y573 584 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 AP4B1Q9Y6B7 739 aa14.02□□□□□ -0.17
PHGDH-233ENST00000642021 TSC2P49815 1807 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 ACOT8O14734 319 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 APOA4P06727 396 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 ARNTP27540 789 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 AFF1P51825 1210 aaKnown RBP14.01□□□□□ -0.17
PHGDH-233ENST00000642021 RPL26P61254 145 aaKnown RBP14.01□□□□□ -0.17
PHGDH-233ENST00000642021 SLC12A1Q13621 1099 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 C6orf52Q5T4I8 152 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 SPATA24Q86W54 205 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 GALNT4Q8N4A0 578 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 RDH11Q8TC12 318 aa14.01□□□□□ -0.17
PHGDH-233ENST00000642021 TMA16Q96EY4 203 aaKnown RBP14.01□□□□□ -0.17
PHGDH-233ENST00000642021 CDCA5Q96FF9 252 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms