RNA–Protein interactions for RNA: ENST00000622464.4

AGAP3-226, Transcript of ArfGAP with GTPase domain, ankyrin repeat and PH domain 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene AGAP3, Length 3,121 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AGAP3-226ENST00000622464 ENTPD5O75356 428 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 USP1O94782 785 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 GJB5O95377 273 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 AHSGP02765 367 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 PROCP04070 461 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 ARNTP27540 789 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SLC1A6P48664 564 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 FAM189BP81408 668 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 BRMS1LQ5PSV4 323 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 NAPEPLDQ6IQ20 393 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 RPS27LQ71UM5 84 aaKnown RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CRLF3Q8IUI8 442 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 OR52K2Q8NGK3 314 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SKA1Q96BD8 255 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CPNE1Q99829 537 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SCML2Q9UQR0 700 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 A0A0D9SEW6 157 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 EIF4E1BA6NMX2 242 aaKnown RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 MATN3O15232 486 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 TLR5O60602 858 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 GLRA3O75311 464 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 ATF6P18850 670 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 GLDCP23378 1020 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 DNAJB2P25686 324 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 HOXD10P28358 340 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 LIMK2P53671 638 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 WNT3AP56704 352 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 USP10Q14694 798 aaKnown RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 PTPRRQ15256 657 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 NFE2Q16621 373 aaPredicted RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 ZNF470Q6ECI4 717 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SH3RF2Q8TEC5 729 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CLPTM1LQ96KA5 538 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SUDS3Q9H7L9 328 aaPredicted RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SP110Q9HB58 689 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 GKN1Q9NS71 199 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 NKX1-2Q9UD57 310 aaPredicted RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SOX13Q9UN79 622 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 KIAA0100Q14667 2235 aaKnown RBP13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CFAP73A6NFT4 308 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CHRNGP07510 517 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CCNCP24863 283 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 OR1D2P34982 312 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 ATG16L1Q676U5 607 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 MAVSQ7Z434 540 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 CEP97Q8IW35 865 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 FAM126BQ8IXS8 530 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 SCYL1Q96KG9 808 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 IL22Q9GZX6 179 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 NACA2Q9H009 215 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 TASP1Q9H6P5 420 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 MTPAPQ9NVV4 582 aaKnown RBP eCLIP13.26□□□□□ -0.293e-6■■■□□ 18.6
AGAP3-226ENST00000622464 SMPD4Q9NXE4 827 aa13.26□□□□□ -0.29
AGAP3-226ENST00000622464 MUSKO15146 869 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 TSPAN3O60637 253 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 ZMPSTE24O75844 475 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 GALTP07902 379 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 ARSAP15289 507 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SPRP35270 261 aaPredicted RBP13.25□□□□□ -0.29
AGAP3-226ENST00000622464 VEGFBP49765 207 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 CCDC15Q0P6D6 951 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 RBM20Q5T481 1227 aaKnown RBP13.25□□□□□ -0.29
AGAP3-226ENST00000622464 NADSYN1Q6IA69 706 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 PTAR1Q7Z6K3 402 aaPredicted RBP13.25□□□□□ -0.29
AGAP3-226ENST00000622464 PGBD5Q8N414 524 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 FAM13CQ8NE31 585 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SPDYE1Q8NFV5 336 aaPredicted RBP13.25□□□□□ -0.29
AGAP3-226ENST00000622464 MAGEC3Q8TD91 643 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 MICAL1Q8TDZ2 1067 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SLC39A13Q96H72 371 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 IL12RB2Q99665 862 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 COPG2Q9UBF2 871 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 TLR6Q9Y2C9 796 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 CASP8AP2Q9UKL3 1982 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 GOLGA8QA0A0J9YX86 632 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 GOLGA8OA6NCC3 632 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 PRR5-ARHGAP8B1AHC4 643 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 GOLGA8NF8WBI6 632 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 NEMP1O14524 444 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SPATA31D3P0C874 917 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 PRSS56P0CW18 603 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 BMP1P13497 986 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SLC1A2P43004 574 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 RPS24P62847 133 aaKnown RBP13.25□□□□□ -0.29
AGAP3-226ENST00000622464 COG7P83436 770 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 ARHGAP8P85298 464 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 GALNT3Q14435 633 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 THEMIS2Q5TEJ8 643 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SPATA31D4Q6ZUB0 917 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 EFCAB3Q8N7B9 438 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 OR7D4Q8NG98 312 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 WBP2Q969T9 261 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SH3GL3Q99963 347 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 NAT9Q9BTE0 207 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 SPON2Q9BUD6 331 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.25□□□□□ -0.291e-6■■■■□ 20.3
AGAP3-226ENST00000622464 FIS1Q9Y3D6 152 aa13.25□□□□□ -0.29
AGAP3-226ENST00000622464 NEMP2A6NFY4 417 aa13.24□□□□□ -0.29
AGAP3-226ENST00000622464 MTSS1O43312 755 aa13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms