RNA–Protein interactions for RNA: ENST00000621269.4

ATXN3-253, Transcript of ataxin 3, humanhuman

TSL 5 BASIC

Gene ATXN3, Length 936 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-253ENST00000621269 FAM72BQ86X60 149 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 RYBPQ8N488 228 aaPredicted RBP24.47■■□□□ 1.51
ATXN3-253ENST00000621269 TMEM145Q8NBT3 493 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 ARHGEF2Q92974 986 aaKnown RBP24.47■■□□□ 1.51
ATXN3-253ENST00000621269 MAGEH1Q9H213 219 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 NDFIP2Q9NV92 336 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 CFAP47Q6ZTR5 3102 aa24.47■■□□□ 1.51
ATXN3-253ENST00000621269 TP53BP1Q12888 1972 aaPredicted RBP24.46■■□□□ 1.51
ATXN3-253ENST00000621269 SIGLEC16A6NMB1 481 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 LRIG2O94898 1065 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 C1SP09871 688 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 HNRNPA2B1P22626 353 aaKnown RBP24.46■■□□□ 1.51
ATXN3-253ENST00000621269 ITGB7P26010 798 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 L1CAMP32004 1257 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 C1QBPQ07021 282 aaKnown RBP24.46■■□□□ 1.51
ATXN3-253ENST00000621269 DNAJC3Q13217 504 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 DNAJC24Q6P3W2 148 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 SLFN11Q7Z7L1 901 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 MARCH9Q86YJ5 346 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 NTAN1Q96AB6 310 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 ISG20Q96AZ6 181 aaKnown RBP24.46■■□□□ 1.51
ATXN3-253ENST00000621269 MAGEB5Q9BZ81 275 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 ZDHHC6Q9H6R6 413 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 RALYQ9UKM9 306 aaKnown RBP24.46■■□□□ 1.51
ATXN3-253ENST00000621269 ACTL7AQ9Y615 435 aa24.46■■□□□ 1.51
ATXN3-253ENST00000621269 COL5A1P20908 1838 aaPredicted RBP24.45■■□□□ 1.5
ATXN3-253ENST00000621269 FAM149AA5PLN7 773 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 ZZEF1O43149 2961 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 RAMP2O60895 175 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 RFPL3O75679 317 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 ADRB3P13945 408 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 NCAPHQ15003 741 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 POLD3Q15054 466 aaPredicted RBP24.45■■□□□ 1.5
ATXN3-253ENST00000621269 SFMBT2Q5VUG0 894 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 SCYL2Q6P3W7 929 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 MON1BQ7L1V2 547 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 TMPRSS12Q86WS5 348 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 PLPP6Q8IY26 295 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 MDM1Q8TC05 714 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 FEM1CQ96JP0 617 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 TM6SF2Q9BZW4 377 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 NAT10Q9H0A0 1025 aaKnown RBP24.45■■□□□ 1.5
ATXN3-253ENST00000621269 FZD3Q9NPG1 666 aa24.45■■□□□ 1.5
ATXN3-253ENST00000621269 ZFR2Q9UPR6 939 aaKnown RBP24.45■■□□□ 1.5
ATXN3-253ENST00000621269 SDC3O75056 442 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 CD160O95971 181 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 FERP16591 822 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 RPS21P63220 83 aaKnown RBP24.44■■□□□ 1.5
ATXN3-253ENST00000621269 MAPK8IP2Q13387 824 aaPredicted RBP24.44■■□□□ 1.5
ATXN3-253ENST00000621269 EFHC2Q5JST6 749 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 SEL1L3Q68CR1 1132 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 KIAA1161Q6NSJ0 714 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 ZNF354CQ86Y25 554 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 AOPEPQ8N6M6 819 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 CALN1Q9BXU9 219 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 IGF2RP11717 2491 aa24.44■■□□□ 1.5
ATXN3-253ENST00000621269 TRABD2BA6NFA1 517 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 DESP17661 470 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 ZNF143P52747 638 aaPredicted RBP24.43■■□□□ 1.5
ATXN3-253ENST00000621269 SNRPD1P62314 119 aaKnown RBP24.43■■□□□ 1.5
ATXN3-253ENST00000621269 TMEM259Q4ZIN3 620 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 APTXQ7Z2E3 356 aaKnown RBP24.43■■□□□ 1.5
ATXN3-253ENST00000621269 KANSL1Q7Z3B3 1105 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 FAM174AQ8TBP5 190 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 LRIG1Q96JA1 1093 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 MCEEQ96PE7 176 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 SLC17A9Q9BYT1 436 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 HSD3B7Q9H2F3 369 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 KLHL11Q9NVR0 708 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 NEU3Q9UQ49 428 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 FADS3Q9Y5Q0 445 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 PTPRBP23467 1997 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 DOCK4Q8N1I0 1966 aa24.43■■□□□ 1.5
ATXN3-253ENST00000621269 PLXNB3Q9ULL4 1909 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 KRIT1O00522 736 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 CCP110O43303 1012 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 KDELR3O43731 214 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 GSRP00390 522 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 ATP1A3P13637 1013 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 EPHB2P29323 1055 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 HNF1BP35680 557 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 ACADVLP49748 655 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 CLDN2P57739 230 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 TYRO3Q06418 890 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 HS1BP3Q53T59 392 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 ACAD10Q6JQN1 1059 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 DCUN1D2Q6PH85 259 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 LEKR1Q6ZMV7 388 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 PARS2Q7L3T8 475 aaKnown RBP24.42■■□□□ 1.5
ATXN3-253ENST00000621269 PYROXD2Q8N2H3 581 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 PDCD7Q8N8D1 485 aaKnown RBP24.42■■□□□ 1.5
ATXN3-253ENST00000621269 OR13H1Q8NG92 308 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 OR6K2Q8NGY2 324 aa24.42■■□□□ 1.5
ATXN3-253ENST00000621269 ZSCAN5CA6NGD5 496 aaPredicted RBP24.41■■□□□ 1.5
ATXN3-253ENST00000621269 A6NNZ2 444 aa24.41■■□□□ 1.5
ATXN3-253ENST00000621269 BUB1O43683 1085 aa24.41■■□□□ 1.5
ATXN3-253ENST00000621269 AP1G1O43747 822 aa24.41■■□□□ 1.5
ATXN3-253ENST00000621269 POP4O95707 220 aaKnown RBP24.41■■□□□ 1.5
ATXN3-253ENST00000621269 JUPP14923 745 aa24.41■■□□□ 1.5
ATXN3-253ENST00000621269 CKMT2P17540 419 aa24.41■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms