RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 A0A087WWV3 80 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TRIM38O00635 465 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TSPAN4O14817 238 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 GPR15P49685 360 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PLCL1Q15111 1095 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TOMM20Q15388 145 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 KLHDC7AQ5VTJ3 777 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CDC42EP5Q6NZY7 148 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF549Q6P9A3 640 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 STK40Q8N2I9 435 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ZFP28Q8NHY6 868 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 HELQQ8TDG4 1101 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 GPRASP2Q96D09 838 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 AHCYL2Q96HN2 611 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PHF20Q9BVI0 1012 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 LY9Q9HBG7 655 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ZNF180Q9UJW8 692 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 KCNIP3Q9Y2W7 256 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 DHRS7Q9Y394 339 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CPSF4O95639 269 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 EPHB2P29323 1055 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TIE1P35590 1138 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 IST1P53990 364 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 SPIDRQ14159 915 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 RAB30Q15771 203 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PKN1Q16512 942 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PTPRNQ16849 979 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 WDR72Q3MJ13 1102 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 VPS26BQ4G0F5 336 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 XKR3Q5GH77 459 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PAGE2BQ5JRK9 111 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 LHFPL3Q86UP9 236 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 SLITRK4Q8IW52 837 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CLYBLQ8N0X4 340 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 SLC44A5Q8NCS7 719 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 OR8H1Q8NGG4 311 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 FAM151AQ8WW52 585 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 MAP3K14Q99558 947 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CST11Q9H112 138 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ANKHQ9HCJ1 492 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TRMT13Q9NUP7 481 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 LEF1Q9UJU2 399 aaPredicted RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 NPHP3-ACAD11A0A0J9YXS1 232 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 HACD1B0YJ81 288 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 RIPK2O43353 540 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 SGTAO43765 313 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PLA2G6O60733 806 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ERVK-10P10266 1014 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PTPN3P26045 913 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 MYBPC3Q14896 1274 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TAF5Q15542 800 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TCEA2Q15560 299 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TKFCQ3LXA3 575 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 FGD3Q5JSP0 725 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ERMARDQ5T6L9 678 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TMPRSS11AQ6ZMR5 421 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 C12orf56Q8IXR9 622 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PCSK9Q8NBP7 692 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 DENND6BQ8NEG7 585 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 BHLHE22Q8NFJ8 381 aaPredicted RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 MAFAQ8NHW3 353 aaPredicted RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 FCGR1BQ92637 280 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 STRBPQ96SI9 672 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TDRD1Q9BXT4 1180 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TRPV5Q9NQA5 729 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PRKAG3Q9UGI9 489 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TRHDEQ9UKU6 1024 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PSMD11O00231 422 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 IFRD1O00458 451 aaPredicted RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 AP3D1O14617 1153 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 DSG3P32926 999 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CD151P48509 253 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PRKCEQ02156 737 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 IL18R1Q13478 541 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PACS1Q6VY07 963 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 FAM20CQ8IXL6 584 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 B3GALNT2Q8NCR0 500 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 SLC30A5Q8TAD4 765 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CDRT15Q96T59 188 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PNKPQ96T60 521 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TBCBQ99426 244 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PHB2Q99623 299 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 MTG1Q9BT17 334 aaPredicted RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CELF4Q9BZC1 486 aaKnown RBP7.25□□□□□ -1.25
COLCA1-205ENST00000620864 FBXO10Q9UK96 956 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 NPTXRO95502 500 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 IFNA6P05013 189 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 FAM228BP0C875 321 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 BGNP21810 368 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 UGT2B15P54855 530 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ADAM17P78536 824 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PERM1Q5SV97 790 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 RAD9BQ6WBX8 426 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 RNF19BQ6ZMZ0 732 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 TBC1D21Q8IYX1 336 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 CPA5Q8WXQ8 436 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 SPOCK3Q9BQ16 436 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 ACTR8Q9H981 624 aa7.25□□□□□ -1.25
COLCA1-205ENST00000620864 PAK6Q9NQU5 681 aaPredicted RBP7.25□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms