RNA–Protein interactions for RNA: ENST00000618621.4

LPP-221, Transcript of LIM domain containing preferred translocation partner in lipoma, humanhuman

TSL 1 (best) BASIC

Gene LPP, Length 18,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPP-221ENST00000618621 NKRFO15226 690 aaKnown RBP eCLIP3.09□□□□□ -1.91
LPP-221ENST00000618621 ATP6V1B2P21281 511 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 AKT1P31749 480 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PKNOX1P55347 436 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 RTP1P59025 263 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ANO7Q6IWH7 933 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 KCNMB4Q86W47 210 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 REPS2Q8NFH8 660 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 SLC44A1Q8WWI5 657 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 S100ZQ8WXG8 99 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 MTF2Q9Y483 593 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 CXCL11O14625 94 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PEX10O60683 326 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 LYNP07948 512 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 COX4I1P13073 169 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 MSH3P20585 1137 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PSMB9P28065 219 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 FKBP1CQ5VVH2 108 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 BROXQ5VW32 411 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 DRICH1Q6PGQ1 229 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 ZNF605Q86T29 641 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ENDOVQ8N8Q3 282 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 BORCS5Q969J3 196 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ACO2Q99798 780 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 EPB41L4BQ9H329 900 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 FAM124BQ9H5Z6 455 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 CITO14578 2027 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TET3O43151 1660 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 EME2A4GXA9 379 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 MEIS2O14770 477 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 MMP8P22894 467 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 CYP2C18P33260 490 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TKTL1P51854 596 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 GTF2A2P52657 109 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 IL2P60568 153 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TRAP1Q12931 704 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 TRAF3Q13114 568 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 RGS21Q2M5E4 152 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 LLGL2Q6P1M3 1020 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 GLB1LQ6UWU2 654 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 RBM44Q6ZP01 1051 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 ZDHHC13Q8IUH4 622 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 C8orf59Q8N0T1 100 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 POU5F2Q8N7G0 328 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PIWIL2Q8TC59 973 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 MCOLN3Q8TDD5 553 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ZBED2Q9BTP6 218 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 WDR12Q9GZL7 423 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 WDR41Q9HAD4 459 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ZFYVE28Q9HCC9 887 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 HPS4Q9NQG7 708 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 GPATCH2LQ9NWQ4 482 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PLK2Q9NYY3 685 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ADGBQ8N7X0 1667 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 INO80Q9ULG1 1556 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 TMEM191CA6NGB0 347 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 FMO4P31512 558 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 IDH3AP50213 366 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 SMAD1Q15797 465 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 GLRA4Q5JXX5 417 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TBC1D21Q8IYX1 336 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 FBXO39Q8N4B4 442 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PDPRQ8NCN5 879 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 WNT8BQ93098 351 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 C7orf26Q96N11 449 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 DHX33Q9H6R0 707 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 CLN6Q9NWW5 311 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 SLC28A1O00337 649 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 PRRG1O14668 218 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ALDH2P05091 517 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 COL6A2P12110 1019 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 IDO1P14902 403 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 SHMT1P34896 483 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TAF6P49848 677 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ELAVL2Q12926 359 aaKnown RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 CAMK2GQ13555 558 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 MZT2BQ6NZ67 158 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TIFABQ6ZNK6 161 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ZNF438Q7Z4V0 828 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 RAB26Q9ULW5 256 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 MAPRE3Q9UPY8 281 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 FRMPD4Q14CM0 1322 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 F5H5T6 163 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 SLC22A2O15244 555 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 BNIP3LO60238 219 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 UMPSP11172 480 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 ST8SIA6P61647 398 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 DACT2Q5SW24 774 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 CCNYL2Q5T2Q4 361 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 RFWD3Q6PCD5 774 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 TMEM132CQ8N3T6 1108 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 SLC4A11Q8NBS3 891 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 BHLHE22Q8NFJ8 381 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 MYRFLQ96LU7 910 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 RPRD1AQ96P16 312 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 QRFPRQ96P65 431 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 GLIS2Q9BZE0 524 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 C6orf62Q9GZU0 229 aaPredicted RBP3.09□□□□□ -1.91
LPP-221ENST00000618621 HDHD2Q9H0R4 259 aa3.09□□□□□ -1.91
LPP-221ENST00000618621 IKZF4Q9H2S9 585 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms