RNA–Protein interactions for RNA: ENST00000590499.1

SMAD4-211, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-211ENST00000590499 PSMA2P25787 234 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 NNMTP40261 264 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 ABL2P42684 1182 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 KRT83P78385 493 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 IRX4P78413 519 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 ARF5P84085 180 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 GNA12Q03113 381 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 VAC14Q08AM6 782 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 DLG2Q15700 870 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 TRIM61Q5EBN2 209 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 EFHC2Q5JST6 749 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 STPG1Q5TH74 334 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 SPECC1LQ69YQ0 1117 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 CYP4V2Q6ZWL3 525 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-211ENST00000590499 FAM124AQ86V42 546 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 MMAAQ8IVH4 418 aaKnown RBP11.46□□□□□ -0.57
SMAD4-211ENST00000590499 VSTM4Q8IW00 320 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 DRC7Q8IY82 874 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 AADATQ8N5Z0 425 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 RNF214Q8ND24 703 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 C1orf216Q8TAB5 229 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 TRIM11Q96F44 468 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 PEBP4Q96S96 227 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 DNAJC7Q99615 494 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 EDEM2Q9BV94 578 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 ACE2Q9BYF1 805 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-211ENST00000590499 C6orf106Q9H6K1 298 aaPredicted RBP11.46□□□□□ -0.57
SMAD4-211ENST00000590499 ARHGAP20Q9P2F6 1191 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMAD4-211ENST00000590499 DOCK9Q9BZ29 2069 aa11.46□□□□□ -0.57
SMAD4-211ENST00000590499 PCNX2A6NKB5 2137 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 PLXNA2O75051 1894 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 A0A087X0T9 212 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 CXorf51AA0A1B0GTR3 108 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 K7ERQ8 282 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 CDX4O14627 284 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ALOX15BO15296 676 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 CBFA2T2O43439 604 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SMAD6O43541 496 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 RNASEH1O60930 286 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ZNF821O75541 412 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SEMA4FO95754 770 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 CD160O95971 181 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SERPINF2P08697 491 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 FAM228BP0C875 321 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SLC8A1P32418 973 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 DRD3P35462 400 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ACVRL1P37023 503 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 PSMD8P48556 350 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SERPINH1P50454 418 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 METAP1P53582 386 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 POU4F2Q12837 409 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 TRIM14Q14142 442 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 DUOXA1Q1HG43 343 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 WDR45BQ5MNZ6 344 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SYCP2LQ5T4T6 812 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 DCAF12L1Q5VU92 463 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 RWDD4Q6NW29 188 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SCYL2Q6P3W7 929 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 LINGO4Q6UY18 593 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ERMP1Q7Z2K6 904 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 RABEPKQ7Z6M1 372 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 RTL3Q8N8U3 475 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 GALNT6Q8NCL4 622 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 CEP76Q8TAP6 659 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ARHGEF2Q92974 986 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ORAI3Q9BRQ5 295 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 GRIP2Q9C0E4 1043 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 BTBD1Q9H0C5 482 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 NOL6Q9H6R4 1146 aaKnown RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SGK2Q9HBY8 427 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ATP13A1Q9HD20 1204 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 RAB6BQ9NRW1 208 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 FBXL12Q9NXK8 326 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SARDHQ9UL12 918 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 PPM1HQ9ULR3 514 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 FZD4Q9ULV1 537 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SLC6A14Q9UN76 642 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 ZBTB32Q9Y2Y4 487 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SCINQ9Y6U3 715 aa11.45□□□□□ -0.58
SMAD4-211ENST00000590499 TP53BP1Q12888 1972 aaPredicted RBP11.45□□□□□ -0.58
SMAD4-211ENST00000590499 SPEGQ15772 3267 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 A0A1W2PP55 124 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 MEI4A8MW99 385 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 WASH4PA8MWX3 477 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 KRTAP9-1A8MXZ3 250 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-211ENST00000590499 CBX4O00257 560 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 MCF2LO15068 1137 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 LRCH4O75427 683 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 CTSLP07711 333 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 C5AR1P21730 350 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 MAOBP27338 520 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 MIPP30301 263 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 ETFBP38117 255 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 ASTE1Q2TB18 679 aaPredicted RBP11.44□□□□□ -0.58
SMAD4-211ENST00000590499 RETSATQ6NUM9 610 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 C22orf39Q6P5X5 142 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 DGLUCYQ7Z3D6 616 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 VPS36Q86VN1 386 aa11.44□□□□□ -0.58
SMAD4-211ENST00000590499 ATP11CQ8NB49 1132 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms