RNA–Protein interactions for RNA: ENST00000589055.3

TMEM259-206, Transcript of transmembrane protein 259, humanhuman

TSL 3

Gene TMEM259, Length 791 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM259-206ENST00000589055 SPATS2Q86XZ4 545 aaKnown RBP16.29■□□□□ 0.2
TMEM259-206ENST00000589055 TMIEQ8NEW7 156 aa16.29■□□□□ 0.2
TMEM259-206ENST00000589055 ARHGEF2Q92974 986 aaKnown RBP16.29■□□□□ 0.2
TMEM259-206ENST00000589055 NTAN1Q96AB6 310 aa16.29■□□□□ 0.2
TMEM259-206ENST00000589055 CCDC114Q96M63 670 aa16.29■□□□□ 0.2
TMEM259-206ENST00000589055 ELF4Q99607 663 aaPredicted RBP16.29■□□□□ 0.2
TMEM259-206ENST00000589055 NOL6Q9H6R4 1146 aaKnown RBP16.29■□□□□ 0.2
TMEM259-206ENST00000589055 ZDHHC6Q9H6R6 413 aa16.29■□□□□ 0.2
TMEM259-206ENST00000589055 GPATCH2LQ9NWQ4 482 aa16.29■□□□□ 0.2
TMEM259-206ENST00000589055 FARP1Q9Y4F1 1045 aaPredicted RBP16.29■□□□□ 0.2
TMEM259-206ENST00000589055 A0A1W2PQU0 124 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 TLR4O00206 839 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 SLC31A1O15431 190 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 PCDHGA12O60330 932 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 TRIM16O95361 564 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 PRNPP04156 253 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 RECQLP46063 649 aaPredicted RBP16.28■□□□□ 0.2
TMEM259-206ENST00000589055 MAPKAPK2P49137 400 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 ZNF143P52747 638 aaPredicted RBP16.28■□□□□ 0.2
TMEM259-206ENST00000589055 SCAPQ12770 1279 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 SUZ12Q15022 739 aaKnown RBP16.28■□□□□ 0.2
TMEM259-206ENST00000589055 IQCB1Q15051 598 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 ASIC2Q16515 512 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 SEL1L3Q68CR1 1132 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 ERN2Q76MJ5 926 aaKnown RBP16.28■□□□□ 0.2
TMEM259-206ENST00000589055 SLFN11Q7Z7L1 901 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 GLRX5Q86SX6 157 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 PDZD3Q86UT5 571 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 PCDH20Q8N6Y1 951 aaKnown RBP16.28■□□□□ 0.2
TMEM259-206ENST00000589055 ADAMTS14Q8WXS8 1223 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 KLC2Q9H0B6 622 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 KDM4CQ9H3R0 1056 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 PREBQ9HCU5 417 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 DYRK4Q9NR20 520 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 GDF3Q9NR23 364 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 ZFR2Q9UPR6 939 aaKnown RBP16.28■□□□□ 0.2
TMEM259-206ENST00000589055 MSRB2Q9Y3D2 182 aa16.28■□□□□ 0.2
TMEM259-206ENST00000589055 DMXL2Q8TDJ6 3036 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 A0A1B0GTH6 734 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 SYCE3A1L190 88 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 SMTNL1A8MU46 457 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 CREB3O43889 395 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 RAMP2O60895 175 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 TNFAIP3P21580 790 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 EPHA8P29322 1005 aaPredicted RBP16.27■□□□□ 0.2
TMEM259-206ENST00000589055 GRK6P43250 576 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 BNIP3Q12983 259 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 CARD16Q5EG05 197 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 EFHC2Q5JST6 749 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 ATXN7L2Q5T6C5 722 aaPredicted RBP16.27■□□□□ 0.2
TMEM259-206ENST00000589055 DCUN1D2Q6PH85 259 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 PARS2Q7L3T8 475 aaKnown RBP16.27■□□□□ 0.2
TMEM259-206ENST00000589055 ZNF571Q7Z3V5 609 aaPredicted RBP16.27■□□□□ 0.2
TMEM259-206ENST00000589055 ZNF354CQ86Y25 554 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 RYBPQ8N488 228 aaPredicted RBP16.27■□□□□ 0.2
TMEM259-206ENST00000589055 SAP25Q8TEE9 199 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 VOPP1Q96AW1 172 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 HEPHQ9BQS7 1158 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 TRIM7Q9C029 511 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 CEP44Q9C0F1 390 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 HAUS4Q9H6D7 363 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 FZD10Q9ULW2 581 aa16.27■□□□□ 0.2
TMEM259-206ENST00000589055 APOBEC2Q9Y235 224 aaKnown RBP16.27■□□□□ 0.2
TMEM259-206ENST00000589055 ADAMTS20P59510 1910 aa16.27■□□□□ 0.19
TMEM259-206ENST00000589055 PLXNB3Q9ULL4 1909 aa16.27■□□□□ 0.19
TMEM259-206ENST00000589055 PTPRBP23467 1997 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 SDC3O75056 442 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 PCDH8O95206 1070 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 SKILP12757 684 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 EPHB2P29323 1055 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 CLDN2P57739 230 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 MAMLD1Q13495 774 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 POLD3Q15054 466 aaPredicted RBP16.26■□□□□ 0.19
TMEM259-206ENST00000589055 CA9Q16790 459 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 ZNF284Q2VY69 593 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 SETMARQ53H47 684 aaPredicted RBP16.26■□□□□ 0.19
TMEM259-206ENST00000589055 SLC45A4Q5BKX6 768 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 HORMAD1Q86X24 394 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 RTL3Q8N8U3 475 aaKnown RBP16.26■□□□□ 0.19
TMEM259-206ENST00000589055 TMEM145Q8NBT3 493 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 SKA1Q96BD8 255 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 HMCESQ96FZ2 354 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 CDC6Q99741 560 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 CNPY3Q9BT09 278 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 HDAC8Q9BY41 377 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 TTYH3Q9C0H2 523 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 MAGEH1Q9H213 219 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 CBX8Q9HC52 389 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 HECAQ9UBI9 543 aaPredicted RBP16.26■□□□□ 0.19
TMEM259-206ENST00000589055 GGT7Q9UJ14 662 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 DMTF1Q9Y222 760 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 ITM2BQ9Y287 266 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 FREM2Q5SZK8 3169 aa16.26■□□□□ 0.19
TMEM259-206ENST00000589055 LAMA5O15230 3695 aa16.25■□□□□ 0.19
TMEM259-206ENST00000589055 ANKRD62A6NC57 917 aa16.25■□□□□ 0.19
TMEM259-206ENST00000589055 EIF4E1BA6NMX2 242 aaKnown RBP16.25■□□□□ 0.19
TMEM259-206ENST00000589055 DDX3XO00571 662 aaKnown RBP eCLIP16.25■□□□□ 0.197e-7■■□□□ 12.8
TMEM259-206ENST00000589055 DKK1O94907 266 aa16.25■□□□□ 0.19
TMEM259-206ENST00000589055 ITGAVP06756 1048 aa16.25■□□□□ 0.19
TMEM259-206ENST00000589055 CCDC172P0C7W6 258 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms