RNA–Protein interactions for RNA: ENST00000583328.5

TOP3A-215, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 727 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-215ENST00000583328 CLSTN2Q9H4D0 955 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 GPR27Q9NS67 375 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 RMND1Q9NWS8 449 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 SPASTQ9UBP0 616 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 IL36AQ9UHA7 158 aa12.57□□□□□ -0.4
TOP3A-215ENST00000583328 RNF103O00237 685 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 FPGTO14772 594 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 RAD51BO15315 384 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 SMAD6O43541 496 aaKnown RBP12.56□□□□□ -0.4
TOP3A-215ENST00000583328 LEFTY1O75610 366 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 ENDOD1O94919 500 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 RHOCP08134 193 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 SLC5A2P31639 672 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 GGCXP38435 758 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 PRCPP42785 496 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 NEK3P51956 506 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 INHBCP55103 352 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 ADKP55263 362 aaKnown RBP12.56□□□□□ -0.4
TOP3A-215ENST00000583328 CDH4P55283 916 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 CETN1Q12798 172 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 MTA1Q13330 715 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 C1orf61Q13536 156 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 TAF5Q15542 800 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 ZNF574Q6ZN55 896 aaPredicted RBP12.56□□□□□ -0.4
TOP3A-215ENST00000583328 C14orf80Q86SX3 495 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 TMEM110Q86TL2 294 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 DEFB106AQ8N104 65 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 FBXO39Q8N4B4 442 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 PSMB7Q99436 277 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 CCDC3Q9BQI4 270 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 SRRTQ9BXP5 876 aaKnown RBP12.56□□□□□ -0.4
TOP3A-215ENST00000583328 SIK2Q9H0K1 926 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 NUP62CLQ9H1M0 184 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 TNKS2Q9H2K2 1166 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 METTL14Q9HCE5 456 aaKnown RBP12.56□□□□□ -0.4
TOP3A-215ENST00000583328 STARD5Q9NSY2 213 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 TBC1D30Q9Y2I9 924 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 FADS3Q9Y5Q0 445 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 HS3ST4Q9Y661 456 aa12.56□□□□□ -0.4
TOP3A-215ENST00000583328 PLD2O14939 933 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 CASC3O15234 703 aaKnown RBP12.55□□□□□ -0.4
TOP3A-215ENST00000583328 SUV39H1O43463 412 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 MED7O43513 233 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 ANXA6P08133 673 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 SFTPCP11686 197 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 KRT5P13647 590 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 ADRB3P13945 408 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 CLCN6P51797 869 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 EIF2B5Q13144 721 aaKnown RBP12.55□□□□□ -0.4
TOP3A-215ENST00000583328 NME3Q13232 169 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 TGIF1Q15583 401 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 ESRP1Q6NXG1 681 aaKnown RBP12.55□□□□□ -0.4
TOP3A-215ENST00000583328 LINGO4Q6UY18 593 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 DPY19L3Q6ZPD9 716 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 ARHGEF19Q8IW93 802 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 SLC35F3Q8IY50 421 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 LIN37Q96GY3 246 aaPredicted RBP12.55□□□□□ -0.4
TOP3A-215ENST00000583328 BOCQ9BWV1 1114 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 GTPBP4Q9BZE4 634 aaKnown RBP12.55□□□□□ -0.4
TOP3A-215ENST00000583328 EPB41L5Q9HCM4 733 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 APOBEC3BQ9UH17 382 aaKnown RBP12.55□□□□□ -0.4
TOP3A-215ENST00000583328 VPS51Q9UID3 782 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 PADI4Q9UM07 663 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 PCDHGA7Q9Y5G6 932 aa12.55□□□□□ -0.4
TOP3A-215ENST00000583328 IGLON5A6NGN9 336 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 TMX2-CTNND1H3BSU7 103 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 PMM2O15305 246 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 SPINT1O43278 529 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 PAGE1O75459 146 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 GCATO75600 419 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 CNTN5O94779 1100 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 LETM1O95202 739 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-215ENST00000583328 ADCY5O95622 1261 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 ITGB2P05107 769 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 FAM87AP0C7U9 286 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 ITGB6P18564 788 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 UGT1A5P35504 534 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 DNA2P51530 1060 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 PDX1P52945 283 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 PMS1P54277 932 aaKnown RBP12.54□□□□□ -0.4
TOP3A-215ENST00000583328 GCNT1Q02742 428 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 SRSF6Q13247 344 aaKnown RBP12.54□□□□□ -0.4
TOP3A-215ENST00000583328 EIF3IQ13347 325 aaKnown RBP12.54□□□□□ -0.4
TOP3A-215ENST00000583328 PTK2BQ14289 1009 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 CAMK4Q16566 473 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 PRRT3Q5FWE3 981 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 TPRG1LQ5T0D9 272 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 C22orf39Q6P5X5 142 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 RAB11FIP2Q7L804 512 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 ZSCAN30Q86W11 494 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 RBFAQ8N0V3 343 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 LMO3Q8TAP4 145 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 LENG8Q96PV6 779 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-215ENST00000583328 SLC2A13Q96QE2 648 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 SLC13A1Q9BZW2 595 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 STRADBQ9C0K7 418 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 TCEAL2Q9H3H9 227 aaPredicted RBP12.54□□□□□ -0.4
TOP3A-215ENST00000583328 KIAA1468Q9P260 1216 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 GULP1Q9UBP9 304 aa12.54□□□□□ -0.4
TOP3A-215ENST00000583328 AHCTF1Q8WYP5 2266 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms