RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 FEM1BQ9UK73 627 aa5.13□□□□□ -1.59
UBR1-205ENST00000564540 OR6C68A6NDL8 312 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 ENO3P13929 434 aaPredicted RBP5.12□□□□□ -1.59
UBR1-205ENST00000564540 GJC1P36383 396 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 PDLIM4P50479 330 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 DSCR9P59020 149 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 BIRC2Q13490 618 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 PRAMEF19Q5SWL8 479 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 ANO1Q5XXA6 986 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 FAM83HQ6ZRV2 1179 aaPredicted RBP5.12□□□□□ -1.59
UBR1-205ENST00000564540 MIGA1Q8NAN2 632 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 SETD9Q8NE22 299 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 ATOH1Q92858 354 aaPredicted RBP5.12□□□□□ -1.59
UBR1-205ENST00000564540 SDCCAG3Q96C92 435 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 RNFT2Q96EX2 444 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 MASTLQ96GX5 879 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 GFM1Q96RP9 751 aaKnown RBP5.12□□□□□ -1.59
UBR1-205ENST00000564540 ARPC5LQ9BPX5 153 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 DERAQ9Y315 318 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 NOTCH4Q99466 2003 aa5.12□□□□□ -1.59
UBR1-205ENST00000564540 NBNO60934 754 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 TGFB3P10600 412 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 ITGB8P26012 769 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 GRK6P43250 576 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 ACTR2P61160 394 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 KEAP1Q14145 624 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 FBXO43Q4G163 708 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 CBWD5Q5RIA9 395 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 NAPEPLDQ6IQ20 393 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 RBM23Q86U06 439 aaKnown RBP5.11□□□□□ -1.59
UBR1-205ENST00000564540 PALB2Q86YC2 1186 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 FTSJ3Q8IY81 847 aaKnown RBP5.11□□□□□ -1.59
UBR1-205ENST00000564540 TMEM57Q8N5G2 664 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 NEXN-AS1Q8NBZ9 246 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 NCSTNQ92542 709 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 PPP1R10Q96QC0 940 aaKnown RBP5.11□□□□□ -1.59
UBR1-205ENST00000564540 DNAJC16Q9Y2G8 782 aa5.11□□□□□ -1.59
UBR1-205ENST00000564540 EYA2O00167 538 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 SOX30O94993 753 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 YWHAQP27348 245 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 NFATC4Q14934 902 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 RPE65Q16518 533 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 ME3Q16798 604 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 NADSYN1Q6IA69 706 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 DCP1BQ8IZD4 617 aaKnown RBP5.1□□□□□ -1.59
UBR1-205ENST00000564540 TEX45Q8NA69 505 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 OR4N2Q8NGD1 307 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 CEP70Q8NHQ1 597 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 RASSF8Q8NHQ8 419 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 GPT2Q8TD30 523 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 CCT6BQ92526 530 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 TMEM18Q96B42 140 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 NPFFR1Q9GZQ6 430 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 WDR6Q9NNW5 1121 aaKnown RBP5.1□□□□□ -1.59
UBR1-205ENST00000564540 CD93Q9NPY3 652 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 CD207Q9UJ71 328 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 SRPRBQ9Y5M8 271 aaKnown RBP5.1□□□□□ -1.59
UBR1-205ENST00000564540 COMMD10Q9Y6G5 202 aa5.1□□□□□ -1.59
UBR1-205ENST00000564540 FAM157AC9JC47 383 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 PRR23D1E9PI22 279 aaPredicted RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 DHX16O60231 1041 aaKnown RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 HBP1O60381 514 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 GLUD1P00367 558 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 IL1AP01583 271 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 MMP3P08254 477 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 DHRS4L1P0CG22 281 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 PRR23D2P0DMB1 279 aaPredicted RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 FGF3P11487 239 aaPredicted RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 NAGAP17050 411 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 HNF1BP35680 557 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 GLUD2P49448 558 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 NUDT6P53370 316 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 GOLGA8FQ08AF8 430 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 MYBPC2Q14324 1141 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 SHBQ15464 509 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 CTXN3Q4LDR2 81 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 TDRD12Q587J7 1177 aaKnown RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 CAPRIN2Q6IMN6 1127 aaKnown RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 GJB7Q6PEY0 223 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 MON1BQ7L1V2 547 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 FJX1Q86VR8 437 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 ANKRD44Q8N8A2 993 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 SMRP1Q8NCR6 262 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 OR14A16Q8NHC5 309 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 TMEM163Q8TC26 289 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 SPPL3Q8TCT6 385 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 TBC1D20Q96BZ9 403 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 ITM2CQ9NQX7 267 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 ATP8A2Q9NTI2 1148 aa5.09□□□□□ -1.59
UBR1-205ENST00000564540 RRP7AQ9Y3A4 280 aaKnown RBP5.09□□□□□ -1.59
UBR1-205ENST00000564540 PRSS44E7EML9 344 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 ASAP2O43150 1006 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 ITM2AO43736 263 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 PEX14O75381 377 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 TCEA3O75764 348 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 PRSS2P07478 247 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 CKMT1AP12532 417 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 TNNT1P13805 278 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 DSC1Q08554 894 aa5.08□□□□□ -1.6
UBR1-205ENST00000564540 TRAF3Q13114 568 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms