RNA–Protein interactions for RNA: ENST00000558065.1

SEMA4B-204, Transcript of semaphorin 4B, humanhuman

TSL 1 (best)

Gene SEMA4B, Length 3,751 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-204ENST00000558065 MAPK12P53778 367 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 HADHBP55084 474 aaKnown RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 GCNT1Q02742 428 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 PTGDRQ13258 359 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 GLYCTKQ8IVS8 523 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 TUFT1Q9NNX1 390 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 EHD3Q9NZN3 535 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 ITGA11Q9UKX5 1188 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 STRIP2Q9ULQ0 834 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 SCML1Q9UN30 329 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 MAGED2Q9UNF1 606 aaPredicted RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 MN1Q10571 1320 aaPredicted RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 IGSF9BQ9UPX0 1349 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 PRAMEF22A3QJZ6 481 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 SDR42E2A6NKP2 422 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 B4E1Z4 1266 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 HTRA2O43464 458 aaPredicted RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 CFBP00751 764 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 ASS1P00966 412 aaKnown RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 GSNP06396 782 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 PROS1P07225 676 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 FCER1AP12319 257 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 IFNAR1P17181 557 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 CYP2A7P20853 494 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 MAOBP27338 520 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 EIF2DP41214 584 aaKnown RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 NEDD8Q15843 81 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 CENPPQ6IPU0 288 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 RTL10Q7L3V2 364 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 STK32CQ86UX6 486 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 SMG7Q92540 1137 aaKnown RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 PHF21AQ96BD5 680 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 MNTQ99583 582 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 LSM14BQ9BX40 385 aaKnown RBP11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 TEX13BQ9BXU2 312 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 LAMP5Q9UJQ1 280 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 PCDHGC3Q9UN70 934 aa11.18□□□□□ -0.62
SEMA4B-204ENST00000558065 A0A0B4J269 797 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 A8MV72 311 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CAPN5O15484 640 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SERPINB2P05120 415 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CYP2D6P10635 497 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CYP2A6P11509 494 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CCND2P30279 289 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 ACSL1P33121 698 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 HMGCLP35914 325 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 ETV4P43268 484 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 BFSP2Q13515 415 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 ZNF174Q15697 407 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SPATS1Q496A3 300 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 FAM47AQ5JRC9 791 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 ZNF544Q6NX49 715 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 BRAT1Q6PJG6 821 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 BEND4Q6ZU67 534 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 KCNK18Q7Z418 384 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 AMIGO1Q86WK6 493 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CCDC185Q8N715 623 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 TFAP2CQ92754 450 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SLCO2A1Q92959 643 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 YIPF5Q969M3 257 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 MCRS1Q96EZ8 462 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 WWP1Q9H0M0 922 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 PLLPQ9Y342 182 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SNX13Q9Y5W8 968 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 PMF1-BGLAPU3KQ54 211 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 TRPM3Q9HCF6 1732 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 KIDINS220Q9ULH0 1771 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 STMND1H3BQB6 276 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 GATCO43716 136 aaKnown RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 MICAL2O94851 1124 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CYP3A4P08684 503 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 NCF2P19878 526 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 HOXA1P49639 335 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 PRIM2P49643 509 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CLCN4P51793 760 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 RTN1Q16799 776 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 TTC33Q6PID6 262 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SYCE2Q6PIF2 218 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 FUBP1Q96AE4 644 aaKnown RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 GAL3ST1Q99999 423 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 GPR88Q9GZN0 384 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 GANQ9H2C0 597 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CNTN3Q9P232 1028 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 COPS3Q9UNS2 423 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 NCANO14594 1321 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 UPK1BO75841 260 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 DLATP10515 647 aaKnown RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 APEHP13798 732 aaKnown RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CAPZA2P47755 286 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 MARCKSL1P49006 195 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 EIF4A1P60842 406 aaKnown RBP11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 TUBB3Q13509 450 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 LAMC2Q13753 1193 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 SSPNQ14714 243 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 PLEKHG6Q3KR16 790 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CATSPEREQ5SY80 951 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 CES4AQ5XG92 561 aa11.17□□□□□ -0.62
SEMA4B-204ENST00000558065 LIPIQ6XZB0 460 aa11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms