RNA–Protein interactions for RNA: ENST00000553981.1

SLIRP-202, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 285 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-202ENST00000553981 SMARCD2Q92925 531 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 CCDC51Q96ER9 411 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SLC22A12Q96S37 553 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 NELL2Q99435 816 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ACO2Q99798 780 aaKnown RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 MMTAG2Q9BU76 263 aaKnown RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 TRMT61BQ9BVS5 477 aaKnown RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 TARS2Q9BW92 718 aaKnown RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SCNM1Q9BWG6 230 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 TTC12Q9H892 705 aaPredicted RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ZDHHC4Q9NPG8 344 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 PRMT7Q9NVM4 692 aaPredicted RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 GDE1Q9NZC3 331 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 GMEB2Q9UKD1 530 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 KLK13Q9UKR3 277 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ANGPTL2Q9UKU9 493 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 YIPF1Q9Y548 306 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 NME7Q9Y5B8 376 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 CITO14578 2027 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 WDFY3Q8IZQ1 3526 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SPAG17Q6Q759 2223 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 ASCC3Q8N3C0 2202 aaKnown RBP3.42□□□□□ -1.86
SLIRP-202ENST00000553981 THADAQ6YHU6 1953 aa3.42□□□□□ -1.86
SLIRP-202ENST00000553981 SPEGQ15772 3267 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ASPMQ8IZT6 3477 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 LNP1A1A4G5 178 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 MARCH11A6NNE9 402 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 B5MCH6 92 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TISP43B9A030 160 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 M0QZQ0 153 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF263O14978 683 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CHADO15335 359 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 PFKFB2O60825 505 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 LRP3O75074 770 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 RFPL3O75679 317 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 SPDEFO95238 335 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CLEC2LP0C7M8 214 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 RBP3P10745 1247 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CDK4P11802 303 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 KCNE1P15382 129 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 HMGA1P17096 107 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CYP11B2P19099 503 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 NMT1P30419 496 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 HOXA6P31267 233 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CXCR5P32302 372 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 MPLP40238 635 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 NPTX2P47972 431 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TOB1P50616 345 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 NRG3P56975 720 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 IRX4P78413 519 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 PRPF4BQ13523 1007 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 MXD4Q14582 209 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 AASDHQ4L235 1098 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CTXN3Q4LDR2 81 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ZC2HC1CQ53FD0 456 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 FAM102AQ5T9C2 384 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ATF7IP2Q5U623 682 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 EMC10Q5UCC4 262 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 PAPD7Q5XG87 772 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 METRNLQ641Q3 311 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CENPPQ6IPU0 288 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 PDZD4Q76G19 769 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ARHGAP30Q7Z6I6 1101 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 DNAJB7Q7Z6W7 309 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 PASD1Q8IV76 773 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 BOLLQ8N9W6 283 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 DEFB124Q8NES8 71 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 BICD2Q8TD16 824 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CCDC12Q8WUD4 166 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 USP13Q92995 863 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 WBP2Q969T9 261 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF274Q96GC6 653 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 ZC3H10Q96K80 434 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 FIZ1Q96SL8 496 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 CYP2S1Q96SQ9 504 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 NEU1Q99519 415 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 JPH2Q9BR39 696 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 FAM126AQ9BYI3 521 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TPSD1Q9BZJ3 242 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TRIM9Q9C026 710 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TRIM6Q9C030 488 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 OSBPL2Q9H1P3 480 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 SLKQ9H2G2 1235 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 LINC00597Q9H2U6 94 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 MS4A5Q9H3V2 200 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 EBF3Q9H4W6 596 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 GKN1Q9NS71 199 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 THG1LQ9NWX6 298 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 MAGEC2Q9UBF1 373 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 AFF4Q9UHB7 1163 aaKnown RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TCEAL9Q9UHQ7 104 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 EVLQ9UI08 416 aaPredicted RBP3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TMPRSS11EQ9UL52 423 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 TNFSF13BQ9Y275 285 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 PCNX2A6NKB5 2137 aa3.41□□□□□ -1.86
SLIRP-202ENST00000553981 USP24Q9UPU5 2620 aa3.4□□□□□ -1.86
SLIRP-202ENST00000553981 PTPRBP23467 1997 aa3.4□□□□□ -1.86
SLIRP-202ENST00000553981 ZNF292O60281 2723 aa3.4□□□□□ -1.86
SLIRP-202ENST00000553981 CCDC196A0A1B0GTZ2 297 aa3.4□□□□□ -1.87
SLIRP-202ENST00000553981 CCDC194A0A1B0GVG4 234 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms