RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 DENND6BQ8NEG7 585 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 TFAP2BQ92481 460 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 RPRD1AQ96P16 312 aaPredicted RBP15.62■□□□□ 0.09
CACNB3-220ENST00000551716 MED15Q96RN5 788 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 FUCA2Q9BTY2 467 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 C1QTNF2Q9BXJ5 285 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 MUC3BQ9H195 1237 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 PISDQ9UG56 409 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 USP25Q9UHP3 1055 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 SERTAD1Q9UHV2 236 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 DOLKQ9UPQ8 538 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 TBC1D30Q9Y2I9 924 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 PAXBP1Q9Y5B6 917 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 DOCK9Q9BZ29 2069 aa15.62■□□□□ 0.09
CACNB3-220ENST00000551716 BSNQ9UPA5 3926 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 TOR1BO14657 336 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 RAD51BO15315 384 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 SPINT1O43278 529 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 TSPAN6O43657 245 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 EPB41P11171 864 aaKnown RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 ME1P48163 572 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 RPL34P49207 117 aaKnown RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 BLKP51451 505 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 PFN3P60673 137 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 YPEL5P62699 121 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 YWHAZP63104 245 aaKnown RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 SRSF6Q13247 344 aaKnown RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 KCNAB2Q13303 367 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 FGL2Q14314 439 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 IGFBP7Q16270 282 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 FAXCQ5TGI0 409 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 FBXL22Q6P050 247 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 TMEM270Q6UE05 265 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 VASH2Q86V25 355 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 CIR1Q86X95 450 aaPredicted RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 DTX1Q86Y01 620 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 PHACTR4Q8IZ21 702 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 GUF1Q8N442 669 aaKnown RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 FSTL5Q8N475 847 aaPredicted RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 INTS4Q96HW7 963 aaKnown RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 KLF6Q99612 283 aaPredicted RBP15.61■□□□□ 0.09
CACNB3-220ENST00000551716 CMKLR1Q99788 373 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 POPDC2Q9HBU9 364 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 GULP1Q9UBP9 304 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 LOXL2Q9Y4K0 774 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 FADS3Q9Y5Q0 445 aa15.61■□□□□ 0.09
CACNB3-220ENST00000551716 NBASA2RRP1 2371 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 CETN3O15182 167 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 MT-CO1P00395 513 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 IGLV3-25P01717 112 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 ALPIP09923 528 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 ADRB3P13945 408 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 HGFP14210 728 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 ITGB7P26010 798 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 L1CAMP32004 1257 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 CCR10P46092 362 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 CYP4F2P78329 520 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 C1orf61Q13536 156 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 ELOCQ15369 112 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 SKIDA1Q1XH10 827 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 KIF26BQ2KJY2 2108 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 EDRF1Q3B7T1 1238 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 UBR7Q8N806 425 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 GRIN3AQ8TCU5 1115 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 RAB7BQ96AH8 199 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 FOXP3Q9BZS1 431 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 LRRN3Q9H3W5 708 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 ST7Q9NRC1 585 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 PCDHA7Q9UN72 937 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 PCDHB4Q9Y5E5 795 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 RP1P56715 2156 aa15.6■□□□□ 0.09
CACNB3-220ENST00000551716 PRAMEF33A0A0G2JMD5 474 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 IQCJ-SCHIP1C9J366 451 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 ACTN4O43707 911 aaKnown RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 PRAMEF10O60809 474 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 LEFTY1O75610 366 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 RHOBTB3O94955 611 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 RPLP0P05388 317 aaKnown RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 TSHRP16473 764 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CDH4P55283 916 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 POLE2P56282 527 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CCL7P80098 99 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CDK17Q00537 523 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 PPARDQ03181 441 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 EIF4EBP2Q13542 120 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 AUHQ13825 339 aaKnown RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 ZFAND4Q86XD8 727 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CHST14Q8NCH0 376 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 STK32AQ8WU08 396 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 HTR3CQ8WXA8 447 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CCDC74AQ96AQ1 378 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 PPP1R13BQ96KQ4 1090 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CATSPER2Q96P56 530 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 LRRC61Q9BV99 259 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 CPEB1Q9BZB8 566 aaKnown RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 THAP9Q9H5L6 903 aa15.59■□□□□ 0.09
CACNB3-220ENST00000551716 AKAP7Q9P0M2 348 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 COL27A1Q8IZC6 1860 aaPredicted RBP15.59■□□□□ 0.09
CACNB3-220ENST00000551716 BLACEA4D250 179 aa15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms