RNA–Protein interactions for RNA: ENST00000549007.1

APAF1-208, Transcript of apoptotic peptidase activating factor 1, humanhuman

TSL 1 (best) BASIC

Gene APAF1, Length 3,492 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APAF1-208ENST00000549007 PDXDC1Q6P996 788 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 H1FNTQ75WM6 255 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 GALNT5Q7Z7M9 940 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 NEK8Q86SG6 692 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 KLHL36Q8N4N3 616 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 OR56A1Q8NGH5 318 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 LENG9Q96B70 501 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PRR11Q96HE9 360 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 LBHD1Q9BQE6 289 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 UNC45AQ9H3U1 944 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ZBTB26Q9HCK0 441 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PCDHGB4Q9UN71 923 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 SHOC2Q9UQ13 582 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 SSX2IPQ9Y2D8 614 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 MKI67P46013 3256 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 MYH7BA7E2Y1 1941 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 FRMPD4Q14CM0 1322 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 IGLV3-22A0A075B6J6 115 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 FAM90A20PA6NIJ5 464 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 MSH4O15457 936 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ERN1O75460 977 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 GGPS1O95749 300 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 XRCC6P12956 609 aaKnown RBP eCLIP4.02□□□□□ -1.77
APAF1-208ENST00000549007 HTR7P34969 479 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PGM1P36871 562 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 RAD52P43351 418 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 NHLH2Q02577 135 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CCNG2Q16589 344 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CEP55Q53EZ4 464 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 SLC9A4Q6AI14 798 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 MAMDC4Q6UXC1 1216 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CRYGNQ8WXF5 182 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CPT1BQ92523 772 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 LPPQ93052 612 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 SERINC2Q96SA4 455 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 MXRA8Q9BRK3 442 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 C17orf80Q9BSJ5 609 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CLPBQ9H078 707 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 XRN2Q9H0D6 950 aaKnown RBP eCLIP4.02□□□□□ -1.77
APAF1-208ENST00000549007 G6PC2Q9NQR9 355 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ZDHHC7Q9NXF8 308 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 DDX25Q9UHL0 483 aaKnown RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 VPS51Q9UID3 782 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 C19orf53Q9UNZ5 99 aaPredicted RBP4.02□□□□□ -1.77
APAF1-208ENST00000549007 SLC27A6Q9Y2P4 619 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 DERAQ9Y315 318 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 PCDHA10Q9Y5I2 948 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 UBIAD1Q9Y5Z9 338 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 CLIC4Q9Y696 253 aa4.02□□□□□ -1.77
APAF1-208ENST00000549007 ZNF236Q9UL36 1845 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 AQP7P3A6NL99 342 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 H3BNC9 293 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 DHHO43323 396 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 RHOP08100 348 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ZNF286BP0CG31 522 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 LYL1P12980 280 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 CR2P20023 1033 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 U2AF2P26368 475 aaKnown RBP eCLIP4.01□□□□□ -1.778e-8■■□□□ 12.3
APAF1-208ENST00000549007 MARCKSP29966 332 aaPredicted RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 CDC25AP30304 524 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ZNF844Q08AG5 666 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 DCTN2Q13561 401 aaKnown RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 GPR68Q15743 365 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 TBCCQ15814 346 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 SPECC1Q5M775 1068 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 GALNT17Q6IS24 598 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 FAM47EQ6ZV65 393 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 TLK2Q86UE8 772 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 SLC15A3Q8IY34 581 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 FAM71DQ8N9W8 422 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 CLEC4CQ8WTT0 213 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ZNF333Q96JL9 665 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 INPP4AQ96PE3 977 aaPredicted RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 USP28Q96RU2 1077 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 RBM15Q96T37 977 aaKnown RBP eCLIP4.01□□□□□ -1.77
APAF1-208ENST00000549007 FOXP1Q9H334 677 aaPredicted RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 PCDH18Q9HCL0 1135 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 VPS4AQ9UN37 437 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 LRRC37A2A6NM11 1700 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 DOCK5Q9H7D0 1870 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 PP2D1A8MPX8 630 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 K7ENM7 598 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 CD3EAPO15446 510 aaKnown RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 CCP110O43303 1012 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 INMTO95050 263 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 GLP2RO95838 553 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 CCNE2O96020 404 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ELANEP08246 267 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ATXN1LP0C7T5 689 aaKnown RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 FGFR4P22455 802 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 TXKP42681 527 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ZBED6P86452 979 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ATP1A4Q13733 1029 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 GRM7Q14831 915 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 ZRSR1Q15695 479 aaKnown RBP4.01□□□□□ -1.77
APAF1-208ENST00000549007 NFIL3Q16649 462 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 HSDL1Q3SXM5 330 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 GRHL2Q6ISB3 625 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 OR6J1Q8NGC5 347 aa4.01□□□□□ -1.77
APAF1-208ENST00000549007 SCFD2Q8WU76 684 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms