RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 SV2BQ7L1I2 683 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 RBFAQ8N0V3 343 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 TTC39CQ8N584 583 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 Q8N9G6 341 aaPredicted RBP9.68□□□□□ -0.86
YBX3-211ENST00000541351 TMIEQ8NEW7 156 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 PCDH19Q8TAB3 1148 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
YBX3-211ENST00000541351 TCTN2Q96GX1 697 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 LURAP1Q96LR2 239 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 DPYSL5Q9BPU6 564 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 HDAC8Q9BY41 377 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 LRRC4Q9HBW1 653 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.68□□□□□ -0.86
YBX3-211ENST00000541351 SLC39A1Q9NY26 324 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 RABGEF1Q9UJ41 708 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 SPENQ96T58 3664 aaKnown RBP9.68□□□□□ -0.86
YBX3-211ENST00000541351 PDZD2O15018 2839 aa9.68□□□□□ -0.86
YBX3-211ENST00000541351 UNC13CQ8NB66 2214 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 TMEM110-MUSTN1A8MSY1 372 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 AGRPO00253 132 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 NUDT21O43809 227 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 BNIP3LO60238 219 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 DIAPH2O60879 1101 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 BMP15O95972 392 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 LONP1P36776 959 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 STK19P49842 368 aaPredicted RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 NEK3P51956 506 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 METAP1P53582 386 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 PMS2P54278 862 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 RNASE9P60153 205 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 PFN3P60673 137 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 RPS24P62847 133 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 MRPL49Q13405 166 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 C16orf72Q14CZ0 275 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 DLG2Q15700 870 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 FAM133BQ5BKY9 247 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 CERCAMQ5T4B2 595 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 TTC39BQ5VTQ0 682 aaPredicted RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 SEL1L3Q68CR1 1132 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 SP5Q6BEB4 398 aaPredicted RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 PM20D1Q6GTS8 502 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 SPRED1Q7Z699 444 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 PIAS4Q8N2W9 510 aaPredicted RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 XXYLT1Q8NBI6 393 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 FRS2Q8WU20 508 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 ASB12Q8WXK4 309 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 SEC14L1Q92503 715 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 ART4Q93070 314 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 ARHGEF26Q96DR7 871 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 CYP3A43Q9HB55 503 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 SFMBT1Q9UHJ3 866 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 ZFR2Q9UPR6 939 aaKnown RBP9.67□□□□□ -0.86
YBX3-211ENST00000541351 PCDHGB7Q9Y5F8 929 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 B3GALT1Q9Y5Z6 326 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 CELSR1Q9NYQ6 3014 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 APCP25054 2843 aa9.67□□□□□ -0.86
YBX3-211ENST00000541351 CCDC168Q8NDH2 2452 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 SDK2Q58EX2 2172 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 B4E171 279 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 NEMP1O14524 444 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 AP1G1O43747 822 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 DPM1O60762 260 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 SORBS2O94875 1100 aaKnown RBP9.66□□□□□ -0.86
YBX3-211ENST00000541351 RASGRP1O95267 797 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 FGF3P11487 239 aaPredicted RBP9.66□□□□□ -0.86
YBX3-211ENST00000541351 CCL4P13236 92 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 VAV1P15498 845 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 HTR1BP28222 390 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CHRNA3P32297 505 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 TXLNAP40222 546 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 TSPAN7P41732 249 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 HDAC4P56524 1084 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 TBX4P57082 545 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 ANAPC15P60006 121 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 INCA1Q0VD86 236 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 BIRC2Q13490 618 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 EDRF1Q3B7T1 1238 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 MS4A13Q5J8X5 152 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 RAB41Q5JT25 222 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 BSPRYQ5W0U4 402 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CEACAM20Q6UY09 585 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 MMS22LQ6ZRQ5 1243 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CCDC65Q8IXS2 484 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 NRSN1Q8IZ57 195 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 SIX6OS1Q8N1H7 587 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 ESX1Q8N693 406 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CCDC150Q8NCX0 1101 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 EDEM3Q9BZQ6 932 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CLPBQ9H078 707 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 FOXD4L1Q9NU39 408 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CGNQ9P2M7 1197 aaKnown RBP9.66□□□□□ -0.86
YBX3-211ENST00000541351 LRIT1Q9P2V4 623 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 TLK1Q9UKI8 766 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 PILRAQ9UKJ1 303 aa9.66□□□□□ -0.86
YBX3-211ENST00000541351 CASC3O15234 703 aaKnown RBP9.65□□□□□ -0.86
YBX3-211ENST00000541351 SPINT1O43278 529 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 TSPAN6O43657 245 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 IGLV3-27P01718 113 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 CD1EP15812 388 aa9.65□□□□□ -0.86
YBX3-211ENST00000541351 PEX5P50542 639 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms