RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 TFE3P19532 575 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 BMP6P22004 513 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 ITGB7P26010 798 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 CXCR3P49682 368 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 NUCB2P80303 420 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 ARL13BQ3SXY8 428 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 HS1BP3Q53T59 392 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 C3orf38Q5JPI3 329 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PERM1Q5SV97 790 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 KIAA1614Q5VZ46 1190 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 SMYD5Q6GMV2 418 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 KIAA1161Q6NSJ0 714 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PARS2Q7L3T8 475 aaKnown RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 EFL1Q7Z2Z2 1120 aaKnown RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 BNIPLQ7Z465 357 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PTAR1Q7Z6K3 402 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 SETD3Q86TU7 594 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 ZSCAN30Q86W11 494 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PARGQ86W56 976 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 SLC35F3Q8IY50 421 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 EXD3Q8N9H8 876 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 TPCN2Q8NHX9 752 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 ASB12Q8WXK4 309 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PGAP3Q96FM1 320 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 DHTKD1Q96HY7 919 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 TBATAQ96M53 351 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 NPY6RQ99463 290 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP7.46□□□□□ -1.22
YBX3-209ENST00000540747 C2orf49Q9BVC5 232 aaPredicted RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 SLC17A9Q9BYT1 436 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 GTPBP4Q9BZE4 634 aaKnown RBP7.46□□□□□ -1.22
YBX3-209ENST00000540747 PIGVQ9NUD9 493 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 DNAJC28Q9NX36 388 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 NCKIPSDQ9NZQ3 722 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 PCDHGC3Q9UN70 934 aa7.46□□□□□ -1.22
YBX3-209ENST00000540747 NOTCH2Q04721 2471 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 DOPEY2Q9Y3R5 2298 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 CXorf51AA0A1B0GTR3 108 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 PPP1R3GB7ZBB8 358 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 LMO7DNF2Z398 122 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 TERTO14746 1132 aaKnown RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 PSMA7O14818 248 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ARHGAP6O43182 974 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 AQP9O43315 295 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 MED7O43513 233 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 BNIP3LO60238 219 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 NOBOXO60393 691 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 GCATO75600 419 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 GRAP2O75791 330 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ERBB2P04626 1255 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ITGA2BP08514 1039 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ZNF18P17022 549 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 RBMS1P29558 406 aaKnown RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 GNA15P30679 374 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 L1CAMP32004 1257 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ABL2P42684 1182 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 RABIFP47224 123 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 SERPINH1P50454 418 aaKnown RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 NEK3P51956 506 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 RPS21P63220 83 aaKnown RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 KRT83P78385 493 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 KCNC4Q03721 635 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 SRSF1Q07955 248 aaKnown RBP eCLIP7.45□□□□□ -1.22
YBX3-209ENST00000540747 CCDC15Q0P6D6 951 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 DRAP1Q14919 205 aaPredicted RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 CDKN3Q16667 212 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 SKOR2Q2VWA4 1001 aaPredicted RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 LINC00303Q3SY05 128 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 PTPN20Q4JDL3 420 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ARSIQ5FYB1 569 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 EFHC1Q5JVL4 640 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 BRMS1LQ5PSV4 323 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 LINGO4Q6UY18 593 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 RBM44Q6ZP01 1051 aaKnown RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 FAM183BPQ6ZVS7 135 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ENOSF1Q7L5Y1 443 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ATP11CQ8NB49 1132 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 DENND6BQ8NEG7 585 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 WDR36Q8NI36 951 aaKnown RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 GRIN3AQ8TCU5 1115 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 SHC3Q92529 594 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 CCDC97Q96F63 343 aaPredicted RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 LIN37Q96GY3 246 aaPredicted RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 PPP1R13BQ96KQ4 1090 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 CCDC114Q96M63 670 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 CEP44Q9C0F1 390 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 MUC3BQ9H195 1237 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 OSBPL2Q9H1P3 480 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 TNKS2Q9H2K2 1166 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 TCEAL2Q9H3H9 227 aaPredicted RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 GDPD2Q9HCC8 539 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 STARD5Q9NSY2 213 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 EVA1BQ9NVM1 165 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 IL36AQ9UHA7 158 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 ATXN7L1Q9ULK2 861 aaPredicted RBP7.45□□□□□ -1.22
YBX3-209ENST00000540747 PCDHGA7Q9Y5G6 932 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 SNX10Q9Y5X0 201 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 UNC79Q9P2D8 2635 aa7.45□□□□□ -1.22
YBX3-209ENST00000540747 CHD5Q8TDI0 1954 aa7.44□□□□□ -1.22
YBX3-209ENST00000540747 SYNJ2BP-COX16A0A087WUM0 186 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms