RNA–Protein interactions for RNA: ENST00000534296.5

CD44-238, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 863 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-238ENST00000534296 ENGASEQ8NFI3 743 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 CEP76Q8TAP6 659 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 TMEM163Q8TC26 289 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 C2CD4CQ8TF44 421 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 TBC1D22AQ8WUA7 517 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 TBC1D20Q96BZ9 403 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 RBM17Q96I25 401 aaKnown RBP2.99□□□□□ -1.93
CD44-238ENST00000534296 PPP1R10Q96QC0 940 aaKnown RBP2.99□□□□□ -1.93
CD44-238ENST00000534296 NPLQ9BXD5 320 aaPredicted RBP2.99□□□□□ -1.93
CD44-238ENST00000534296 KRTAP1-5Q9BYS1 174 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 CDT1Q9H211 546 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 PLEKHA2Q9HB19 425 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 ENTPD7Q9NQZ7 604 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 GRHL1Q9NZI5 618 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 LUZP4Q9P127 313 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 IFT80Q9P2H3 777 aaPredicted RBP2.99□□□□□ -1.93
CD44-238ENST00000534296 SRP68Q9UHB9 627 aaKnown RBP2.99□□□□□ -1.93
CD44-238ENST00000534296 ZNF112Q9UJU3 913 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 DERAQ9Y315 318 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 PAM16Q9Y3D7 125 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 PTGDR2Q9Y5Y4 395 aa2.99□□□□□ -1.93
CD44-238ENST00000534296 IPO5O00410 1097 aaKnown RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 RGS14O43566 566 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 ITM2AO43736 263 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 SH3BP5O60239 455 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 GLUD1P00367 558 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 ACAA1P09110 424 aaPredicted RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 FGF3P11487 239 aaPredicted RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 NAGAP17050 411 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 GJC1P36383 396 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 GLUD2P49448 558 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 NUDT6P53370 316 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 PRKAA2P54646 552 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 SLC12A1Q13621 1099 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 BYSLQ13895 437 aaKnown RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 DUSP6Q16828 381 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 TMEM95Q3KNT9 176 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 TUBB8Q3ZCM7 444 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 LRRC24Q50LG9 513 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 EFHC1Q5JVL4 640 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 NADSYN1Q6IA69 706 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 CAPRIN2Q6IMN6 1127 aaKnown RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 C8orf82Q6P1X6 216 aaPredicted RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 DENND1BQ6P3S1 775 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 MON1BQ7L1V2 547 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 PRR26Q8N8Z3 221 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 CEP70Q8NHQ1 597 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 CSGALNACT1Q8TDX6 532 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 NEUROG1Q92886 237 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 USP13Q92995 863 aaPredicted RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 POLDIP3Q9BY77 421 aaKnown RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 VPS33BQ9H267 617 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 SLCO5A1Q9H2Y9 848 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 C6orf106Q9H6K1 298 aaPredicted RBP2.98□□□□□ -1.93
CD44-238ENST00000534296 CHODLQ9H9P2 273 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 CD93Q9NPY3 652 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 RASSF1Q9NS23 344 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 RRN3Q9NYV6 651 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 ICKQ9UPZ9 632 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 RCE1Q9Y256 329 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 CNPY2Q9Y2B0 182 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 GDAQ9Y2T3 454 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 MST1RQ04912 1400 aa2.98□□□□□ -1.93
CD44-238ENST00000534296 TTC3P53804 2025 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 CCDC196A0A1B0GTZ2 297 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 A0A1B0GVT2 93 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 BECN2A8MW95 431 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 INAFM1C9JVW0 142 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 EIF3FO00303 357 aaPredicted RBP2.97□□□□□ -1.93
CD44-238ENST00000534296 HSPB6O14558 160 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 TSPAN3O60637 253 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 SERPINI2O75830 405 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 FAM155BO75949 473 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 LCATP04180 440 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 IFIT1P09914 478 aaKnown RBP2.97□□□□□ -1.93
CD44-238ENST00000534296 WEE2P0C1S8 567 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 LYL1P12980 280 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 DPP6P42658 865 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 PPP3CCP48454 512 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 MVDP53602 400 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 POU5F1BQ06416 359 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 CUL4BQ13620 913 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 IL13RA2Q14627 380 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 PLCB4Q15147 1175 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 SHBQ15464 509 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 AP5B1Q2VPB7 878 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 SYTL3Q4VX76 610 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 TDRD12Q587J7 1177 aaKnown RBP2.97□□□□□ -1.93
CD44-238ENST00000534296 ZNF484Q5JVG2 852 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 JMJD6Q6NYC1 403 aaPredicted RBP2.97□□□□□ -1.93
CD44-238ENST00000534296 TMEM71Q6P5X7 295 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 MMS22LQ6ZRQ5 1243 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 CREB3L2Q70SY1 520 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 TRILQ7L0X0 811 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 ZNF367Q7RTV3 350 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 FJX1Q86VR8 437 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 MIGA1Q8NAN2 632 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 USP38Q8NB14 1042 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 SMRP1Q8NCR6 262 aa2.97□□□□□ -1.93
CD44-238ENST00000534296 DNAAF1Q8NEP3 725 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms