RNA–Protein interactions for RNA: ENST00000533811.1

PACS1-214, Transcript of phosphofurin acidic cluster sorting protein 1, humanhuman

TSL 3

Gene PACS1, Length 541 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACS1-214ENST00000533811 SPASTQ9UBP0 616 aa9.45□□□□□ -0.9
PACS1-214ENST00000533811 GULP1Q9UBP9 304 aa9.45□□□□□ -0.9
PACS1-214ENST00000533811 PISDQ9UG56 409 aa9.45□□□□□ -0.9
PACS1-214ENST00000533811 APOBEC3BQ9UH17 382 aaKnown RBP9.45□□□□□ -0.9
PACS1-214ENST00000533811 ARMCX3Q9UH62 379 aaPredicted RBP9.45□□□□□ -0.9
PACS1-214ENST00000533811 VPS51Q9UID3 782 aa9.45□□□□□ -0.9
PACS1-214ENST00000533811 DOLKQ9UPQ8 538 aa9.45□□□□□ -0.9
PACS1-214ENST00000533811 ZFC3H1O60293 1989 aaKnown RBP9.44□□□□□ -0.9
PACS1-214ENST00000533811 COL12A1Q99715 3063 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 IGLON5A6NGN9 336 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 NEMP1O14524 444 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 SPINT1O43278 529 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 SUV39H1O43463 412 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 PPFIA2O75334 1257 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 CLDN11O75508 207 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 GCATO75600 419 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 CNTN5O94779 1100 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 IGLV3-25P01717 112 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 JMJD7P0C870 316 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 ADRB3P13945 408 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 UGT1A5P35504 534 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 GPD2P43304 727 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 FMO5P49326 533 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 THOP1P52888 689 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 CDH4P55283 916 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 MCCD1P59942 119 aaPredicted RBP9.44□□□□□ -0.9
PACS1-214ENST00000533811 TLE1Q04724 770 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 EIF2B5Q13144 721 aaKnown RBP9.44□□□□□ -0.9
PACS1-214ENST00000533811 NME3Q13232 169 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 TAF5Q15542 800 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 FAXCQ5TGI0 409 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 ATL3Q6DD88 541 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 ESRP1Q6NXG1 681 aaKnown RBP9.44□□□□□ -0.9
PACS1-214ENST00000533811 C22orf39Q6P5X5 142 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 DPY19L3Q6ZPD9 716 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 RAB11FIP2Q7L804 512 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 ARHGEF19Q8IW93 802 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 PHACTR4Q8IZ21 702 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 DEFB106AQ8N104 65 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 BTN2A2Q8WVV5 523 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 SLC35C1Q96A29 364 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 SPATA32Q96LK8 384 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 MED15Q96RN5 788 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 PSMB7Q99436 277 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 C2orf49Q9BVC5 232 aaPredicted RBP9.44□□□□□ -0.9
PACS1-214ENST00000533811 BOCQ9BWV1 1114 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 HDAC8Q9BY41 377 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 SLC13A1Q9BZW2 595 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 STRADBQ9C0K7 418 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 THAP9Q9H5L6 903 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 GPR27Q9NS67 375 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 PADI4Q9UM07 663 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 HPSEQ9Y251 543 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 HS3ST2Q9Y278 367 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 OR51B4Q9Y5P0 310 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 FADS3Q9Y5Q0 445 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 HS3ST4Q9Y661 456 aa9.44□□□□□ -0.9
PACS1-214ENST00000533811 TLN1Q9Y490 2541 aaKnown RBP9.44□□□□□ -0.9
PACS1-214ENST00000533811 BOD1L1Q8NFC6 3051 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 CHD5Q8TDI0 1954 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 TRIM49BA6NDI0 452 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 RIOK3O14730 519 aaKnown RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 TPP1O14773 563 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 THAP12O43422 761 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 PAGE1O75459 146 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 LETM1O95202 739 aaPredicted RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 NTRK1P04629 796 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 ITGB2P05107 769 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 ITGB6P18564 788 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 NOS2P35228 1153 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 PRCPP42785 496 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 INHBCP55103 352 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 CYP4F2P78329 520 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 FKBP3Q00688 224 aaKnown RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 PKP1Q13835 747 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 CCDC40Q4G0X9 1142 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 XKR5Q6UX68 686 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 BEND5Q7L4P6 421 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 TFAP2DQ7Z6R9 452 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 VPS36Q86VN1 386 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 PTRH1Q86Y79 214 aaKnown RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 SDR16C5Q8N3Y7 309 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 RYBPQ8N488 228 aaPredicted RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 ZSCAN1Q8NBB4 408 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 KYQ8NBH2 561 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 CCDC74AQ96AQ1 378 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 LIN37Q96GY3 246 aaPredicted RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 GFM1Q96RP9 751 aaKnown RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 SPON2Q9BUD6 331 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 LRRC61Q9BV99 259 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 SLC4A5Q9BY07 1137 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 CPEB1Q9BZB8 566 aaKnown RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 ZDHHC6Q9H6R6 413 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 METTL14Q9HCE5 456 aaKnown RBP9.43□□□□□ -0.9
PACS1-214ENST00000533811 SEPT10Q9P0V9 454 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 SEPT3Q9UH03 358 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 ITM2BQ9Y287 266 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 SNX10Q9Y5X0 201 aa9.43□□□□□ -0.9
PACS1-214ENST00000533811 WASF2Q9Y6W5 498 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 63.7 ms