RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 PRCCQ92733 491 aaPredicted RBP15.27■□□□□ 0.03
USP47-207ENST00000527733 ELAC1Q9H777 363 aaKnown RBP15.27■□□□□ 0.03
USP47-207ENST00000527733 DEC1Q9P2X7 70 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 APPL1Q9UKG1 709 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 ACTL7BQ9Y614 415 aa15.27■□□□□ 0.03
USP47-207ENST00000527733 B2RBV5 119 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 PHGDHO43175 533 aaKnown RBP15.26■□□□□ 0.03
USP47-207ENST00000527733 ABCG1P45844 678 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 SOX4Q06945 474 aaPredicted RBP15.26■□□□□ 0.03
USP47-207ENST00000527733 BOP1Q14137 746 aaKnown RBP15.26■□□□□ 0.03
USP47-207ENST00000527733 PHF21BQ96EK2 531 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 TMPRSS4Q9NRS4 437 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 SYBUQ9NX95 663 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 MYH4Q9Y623 1939 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 NDST2P52849 883 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 LRRC8EQ6NSJ5 796 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 LRRC8BQ6P9F7 803 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 CPT1BQ92523 772 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 SMOQ99835 787 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 CRTAC1Q9NQ79 661 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 CLIC5Q9NZA1 410 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 TLR6Q9Y2C9 796 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 UBR3Q6ZT12 1888 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 A0A1B0GUL6 1792 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 TCRBV9S1A1TA0A576 114 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 AIM2O14862 343 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 GRM6O15303 877 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 GALTP07902 379 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 CDH5P33151 784 aaPredicted RBP15.26■□□□□ 0.03
USP47-207ENST00000527733 ARL4DP49703 201 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 DDX39BQ13838 428 aaKnown RBP15.26■□□□□ 0.03
USP47-207ENST00000527733 AFTPHQ6ULP2 937 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 NAT16Q8N8M0 369 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 C1QTNF7Q9BXJ2 289 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 NMRK1Q9NWW6 199 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 COMMD8Q9NX08 183 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 FBXO5Q9UKT4 447 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 SNX10Q9Y5X0 201 aa15.26■□□□□ 0.03
USP47-207ENST00000527733 C1orf232A0A0U1RR37 186 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 IFRD1O00458 451 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 CLCN5P51795 746 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 AQP5P55064 265 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 CAMK2GQ13555 558 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 FBXO39Q8N4B4 442 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 SLC26A7Q8TE54 656 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 AUTS2Q8WXX7 1259 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ASPSCR1Q9BZE9 553 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 HAPLN2Q9GZV7 340 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 PNPLA8Q9NP80 782 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 MATN3O15232 486 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 RAD51BO15315 384 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 GCATO75600 419 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 NFATC1O95644 943 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 KCNA4P22459 653 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 TTPAP49638 278 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ZNF461Q8TAF7 563 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 NSL1Q96IY1 281 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 PPP1R10Q96QC0 940 aaKnown RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 PIGVQ9NUD9 493 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 DTLQ9NZJ0 730 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 FAM50BQ9Y247 325 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 IL1R2P27930 398 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ZNF132P52740 706 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 KCNK10P57789 538 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 SATB1Q01826 763 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 PRKAA1Q13131 559 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 HNRNPDQ14103 355 aaKnown RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 CNGA3Q16281 694 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 KCTD19Q17RG1 926 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 GET4Q7L5D6 327 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 TRMT11Q7Z4G4 463 aaKnown RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 OOSP2Q86WS3 158 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 R3HDMLQ9H3Y0 253 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ZNF446Q9NWS9 450 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 GJD2Q9UKL4 321 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ZFP37Q9Y6Q3 630 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 MYH11P35749 1972 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 TBX18O95935 607 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 IL2P60568 153 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 CLDN10P78369 228 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ANKS6Q68DC2 871 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 OTOP3Q7RTS5 596 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 SLC7A5P2Q9GIP4 190 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 ACTR8Q9H981 624 aa15.25■□□□□ 0.03
USP47-207ENST00000527733 FBXO6Q9NRD1 293 aaPredicted RBP15.25■□□□□ 0.03
USP47-207ENST00000527733 A0A087X1B8 175 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 TPP1O14773 563 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 E2F6O75461 281 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 IL1BP01584 269 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 CYP2A7P20853 494 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 ARHGDIAP52565 204 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 AP2B1P63010 937 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 GPM6BQ13491 265 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 GALNT3Q14435 633 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 ITIH4Q14624 930 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 CHPFQ8IZ52 775 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 VPS37AQ8NEZ2 397 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 OR7D4Q8NG98 312 aa15.24■□□□□ 0.03
USP47-207ENST00000527733 RNF217Q8TC41 542 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms