RNA–Protein interactions for RNA: ENST00000523814.5

SPIDR-221, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 802 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-221ENST00000523814 ACVRL1P37023 503 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 MAPKAPK2P49137 400 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 DNA2P51530 1060 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 GSCP56915 257 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-221ENST00000523814 CDO1Q16878 200 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 PROX2Q3B8N5 592 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 FAM72AQ5TYM5 149 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 FAM72DQ6L9T8 149 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 C19orf48Q6RUI8 117 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 ABI3BPQ7Z7G0 1075 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 FAM72BQ86X60 149 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 PHF13Q86YI8 300 aaPredicted RBP17.12■□□□□ 0.33
SPIDR-221ENST00000523814 C11orf70Q9BRQ4 267 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 MAGEB5Q9BZ81 275 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 MAGEH1Q9H213 219 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 NDFIP2Q9NV92 336 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 TMEM248Q9NWD8 314 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 ADAM22Q9P0K1 906 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 LIMA1Q9UHB6 759 aaKnown RBP17.12■□□□□ 0.33
SPIDR-221ENST00000523814 HS3ST3A1Q9Y663 406 aa17.12■□□□□ 0.33
SPIDR-221ENST00000523814 DOCK9Q9BZ29 2069 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 TRIM38O00635 465 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 AP1G1O43747 822 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 LRIG2O94898 1065 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 GJB6O95452 261 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 PLEKP08567 350 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 ADRB3P13945 408 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 DGKAP23743 735 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 ACP1P24666 158 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 HNF1BP35680 557 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 CCNHP51946 323 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 NEK3P51956 506 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 COPB1P53618 953 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 HDAC4P56524 1084 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 GEMIN4P57678 1058 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 RPS21P63220 83 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 SYCP1Q15431 976 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 CLEC16AQ2KHT3 1053 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 SEL1L3Q68CR1 1132 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 RWDD4Q6NW29 188 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 FBXL19Q6PCT2 694 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 DCP2Q8IU60 420 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 CACTIN-AS1Q8N1I8 211 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 OR13H1Q8NG92 308 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 ARHGEF2Q92974 986 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 NTAN1Q96AB6 310 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 IFT43Q96FT9 208 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 LRIG1Q96JA1 1093 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 FEM1CQ96JP0 617 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 SLC17A9Q9BYT1 436 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 FZD3Q9NPG1 666 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 SCUBE2Q9NQ36 999 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 HECAQ9UBI9 543 aaPredicted RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 NEU3Q9UQ49 428 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 FCF1Q9Y324 198 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 FADS3Q9Y5Q0 445 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 ACTL7AQ9Y615 435 aa17.11■□□□□ 0.33
SPIDR-221ENST00000523814 GOLGA4Q13439 2230 aaKnown RBP17.11■□□□□ 0.33
SPIDR-221ENST00000523814 SIGLEC16A6NMB1 481 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 LGALS16A8MUM7 142 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 SIGLEC6O43699 453 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 SDC3O75056 442 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 NSFP46459 744 aaKnown RBP17.1■□□□□ 0.33
SPIDR-221ENST00000523814 CLDN2P57739 230 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 KIAA1161Q6NSJ0 714 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 WDR59Q6PJI9 974 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 GCNT7Q6ZNI0 430 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 ZSCAN30Q86W11 494 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 CCDC185Q8N715 623 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 FAM172AQ8WUF8 416 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 RFFLQ8WZ73 363 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 VOPP1Q96AW1 172 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 BMFQ96LC9 184 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 MYOCQ99972 504 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 ANO10Q9NW15 660 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 DNAI1Q9UI46 699 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 HPCAL4Q9UM19 191 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 KNTC1P50748 2209 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 APC2O95996 2303 aa17.1■□□□□ 0.33
SPIDR-221ENST00000523814 ARID1BQ8NFD5 2236 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-221ENST00000523814 KDELR3O43731 214 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 PAK4O96013 591 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-221ENST00000523814 CALB1P05937 261 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 CLDN6P56747 220 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 MYL5Q02045 173 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 TARDBPQ13148 414 aaKnown RBP eCLIP17.09■□□□□ 0.33
SPIDR-221ENST00000523814 FGL2Q14314 439 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 COL28A1Q2UY09 1125 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 HES3Q5TGS1 186 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 SASS6Q6UVJ0 657 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 Q6ZSR6 202 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 SLC22A18ASQ8N1D0 253 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 C3orf20Q8ND61 904 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 ANKRD20A12PQ8NF67 263 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 NEK11Q8NG66 645 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 OR4C6Q8NH72 309 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 RAB7BQ96AH8 199 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 TBC1D31Q96DN5 1066 aa17.09■□□□□ 0.33
SPIDR-221ENST00000523814 LENG8Q96PV6 779 aaPredicted RBP17.09■□□□□ 0.33
SPIDR-221ENST00000523814 ERGIC2Q96RQ1 377 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms