RNA–Protein interactions for RNA: ENST00000511081.5

CLDND1-223, Transcript of claudin domain containing 1, human

TSL 2 BASIC

Gene CLDND1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CLDND1-223	ENST00000511081		A0A1W2PQJ5	194 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	SYCE3	A1L190	88 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	ANKRD62	A6NC57	917 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	TLR4	O00206	839 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	KCNK3	O14649	394 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	FLRT2	O43155	660 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	KDELR3	O43731	214 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	RNGTT	O60942	597 aa	Known RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	TOP3B	O95985	862 aa	Known RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	FTL	P02792	175 aa	Predicted RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	HTR7	P34969	479 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	RXRG	P48443	463 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	GEMIN4	P57678	1058 aa	Known RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	FANCC	Q00597	558 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	OVGP1	Q12889	678 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	POLD3	Q15054	466 aa	Predicted RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	ASIC2	Q16515	512 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	INO80D	Q53TQ3	878 aa	Predicted RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	EFHC2	Q5JST6	749 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	HGSNAT	Q68CP4	663 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	NAPEPLD	Q6IQ20	393 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	RWDD4	Q6NW29	188 aa	Known RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	DCUN1D2	Q6PH85	259 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	LAYN	Q6UX15	382 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	ERN2	Q76MJ5	926 aa	Known RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	RTL3	Q8N8U3	475 aa	Known RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	FNIP1	Q8TF40	1166 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	LRIG1	Q96JA1	1093 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	SERAC1	Q96JX3	654 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	ELF4	Q99607	663 aa	Predicted RBP	12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	CDC6	Q99741	560 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	HEPH	Q9BQS7	1158 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	SCNM1	Q9BWG6	230 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	TNKS2	Q9H2K2	1166 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	IL36A	Q9UHA7	158 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	IGF2R	P11717	2491 aa		12.37	□□□□□ -0.43
CLDND1-223	ENST00000511081	CHD6	Q8TD26	2715 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	EIF3CL	B5ME19	914 aa	Known RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	KPNA3	O00505	521 aa	Predicted RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	BNIP3L	O60238	219 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	RAMP2	O60895	175 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	LEFTY1	O75610	366 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	SERPINC1	P01008	464 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	PTMS	P20962	102 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	EPHB2	P29323	1055 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	RECQL	P46063	649 aa	Predicted RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	NXPH1	P58417	271 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	KLHL30	Q0D2K2	578 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	FOXC1	Q12948	553 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	SHB	Q15464	509 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	ZNF284	Q2VY69	593 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	SCYL2	Q6P3W7	929 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	TMC6	Q7Z403	805 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	ADAT2	Q7Z6V5	191 aa	Known RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	SLCO6A1	Q86UG4	719 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	LUZP1	Q86V48	1076 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	RHBDD1	Q8TEB9	315 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	CASKIN2	Q8WXE0	1202 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	ADAMTS14	Q8WXS8	1223 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	EIF3C	Q99613	913 aa	Known RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	TOR4A	Q9NXH8	423 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	HPCAL4	Q9UM19	191 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	ZFR2	Q9UPR6	939 aa	Known RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	BTBD3	Q9Y2F9	522 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	NEUROG3	Q9Y4Z2	214 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	PCDHB9	Q9Y5E1	797 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	ACTL7A	Q9Y615	435 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	BZW2	Q9Y6E2	419 aa	Known RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	DSP	P15924	2871 aa	Known RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	CFAP47	Q6ZTR5	3102 aa		12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	TP53BP1	Q12888	1972 aa	Predicted RBP	12.36	□□□□□ -0.43
CLDND1-223	ENST00000511081	LAMA5	O15230	3695 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	TRPM6	Q9BX84	2022 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	TMCO5B	A8MYB1	307 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	PRAMEF26	H0Y7S4	382 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	AP1G1	O43747	822 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	POP4	O95707	220 aa	Known RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	GSR	P00390	522 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	SKIL	P12757	684 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	ITGB7	P26010	798 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	CCT8	P50990	548 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	CCNH	P51946	323 aa	Predicted RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	UBASH3A	P57075	661 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	C21orf59	P57076	290 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	SERINC3	Q13530	473 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	ACAP1	Q15027	740 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	MYLK3	Q32MK0	819 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	POM121L1P	Q3SYA9	428 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	TMEM259	Q4ZIN3	620 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	SETMAR	Q53H47	684 aa	Predicted RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	ERMARD	Q5T6L9	678 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	CYP4V2	Q6ZWL3	525 aa	Predicted RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	KANSL1	Q7Z3B3	1105 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	HORMAD1	Q86X24	394 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	SPATS2	Q86XZ4	545 aa	Known RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	DNAAF5	Q86Y56	855 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	PSTK	Q8IV42	348 aa	Known RBP	12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	TMEM145	Q8NBT3	493 aa		12.35	□□□□□ -0.43
CLDND1-223	ENST00000511081	SAP25	Q8TEE9	199 aa		12.35	□□□□□ -0.43

Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms