RNA–Protein interactions for RNA: ENST00000509637.6

RAB40C-202, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB40C, Length 565 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-202ENST00000509637 NEU3Q9UQ49 428 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 FHOD1Q9Y613 1164 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 HS3ST3A1Q9Y663 406 aa16.24■□□□□ 0.19
RAB40C-202ENST00000509637 IGLON5A6NGN9 336 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 CYSRT1A8MQ03 144 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 FAM72CH0Y354 149 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 TK2O00142 265 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 KALRNO60229 2985 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 SRGAP2O75044 1071 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
RAB40C-202ENST00000509637 GJB6O95452 261 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 PRNPP04156 253 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 ADRB3P13945 408 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 CYP11B1P15538 503 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 AKT2P31751 481 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 KRT9P35527 623 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 C19orf57Q0VDD7 668 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 MAPK8IP2Q13387 824 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-202ENST00000509637 SLC25A52Q3SY17 297 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 FAM72AQ5TYM5 149 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 TAF3Q5VWG9 929 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 FAM72DQ6L9T8 149 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 GUSBP11Q6P575 273 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 GPR155Q7Z3F1 870 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 NOP9Q86U38 636 aaKnown RBP16.23■□□□□ 0.19
RAB40C-202ENST00000509637 FAM72BQ86X60 149 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 FAM131BQ86XD5 332 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 FAM181AQ8N9Y4 354 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 OR6K2Q8NGY2 324 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 CFAP57Q96MR6 1250 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 PPP1R9BQ96SB3 815 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 C2orf49Q9BVC5 232 aaPredicted RBP16.23■□□□□ 0.19
RAB40C-202ENST00000509637 C1QTNF2Q9BXJ5 285 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 NAA15Q9BXJ9 866 aaKnown RBP16.23■□□□□ 0.19
RAB40C-202ENST00000509637 DNAJC28Q9NX36 388 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 NLGN3Q9NZ94 848 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 SSUH2Q9Y2M2 353 aa16.23■□□□□ 0.19
RAB40C-202ENST00000509637 SPTY2D1-AS1A0A0U1RR47 76 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 ILVBLA1L0T0 632 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 EIF4E1BA6NMX2 242 aaKnown RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 RRP8O43159 456 aaKnown RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 USP12O75317 370 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 GCATO75600 419 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 CSF2P04141 144 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 PLA2G2AP14555 144 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 OR1E1P30953 314 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 L1CAMP32004 1257 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 ACTN2P35609 894 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 SERPINH1P50454 418 aaKnown RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 CLCN6P51797 869 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 CCNHP51946 323 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 CXADRP78310 365 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 GABREP78334 506 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 HSP90AA4PQ58FG1 418 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 CARD16Q5EG05 197 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 PERM1Q5SV97 790 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 MANEALQ5VSG8 457 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 LEKR1Q6ZMV7 388 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 PTAR1Q7Z6K3 402 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 PHLDB2Q86SQ0 1253 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 RBFAQ8N0V3 343 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 EMC1Q8N766 993 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 ZNF548Q8NEK5 533 aaPredicted RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 FUBP1Q96AE4 644 aaKnown RBP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 C18orf8Q96DM3 657 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 HEPHQ9BQS7 1158 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP16.22■□□□□ 0.19
RAB40C-202ENST00000509637 TM6SF2Q9BZW4 377 aa16.22■□□□□ 0.19
RAB40C-202ENST00000509637 CFAP46Q8IYW2 2715 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 ATMQ13315 3056 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 A6NNZ2 444 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 GOLGA8SH3BPF8 625 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 LZTS3O60299 673 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-202ENST00000509637 DXOO77932 396 aaKnown RBP16.21■□□□□ 0.19
RAB40C-202ENST00000509637 MMEP08473 750 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 KRT10P13645 584 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 NME1P15531 152 aaKnown RBP16.21■□□□□ 0.19
RAB40C-202ENST00000509637 ITGB7P26010 798 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 NEK3P51956 506 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 PFN3P60673 137 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 GNA12Q03113 381 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 CDKN3Q16667 212 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 FAM102AQ5T9C2 384 aaPredicted RBP16.21■□□□□ 0.19
RAB40C-202ENST00000509637 CRTC1Q6UUV9 634 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 KYAT3Q6YP21 454 aaKnown RBP16.21■□□□□ 0.19
RAB40C-202ENST00000509637 NLRP14Q86W24 1093 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 DRC7Q8IY82 874 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 IFI44Q8TCB0 444 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 CPA5Q8WXQ8 436 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 BAP1Q92560 729 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 IFT43Q96FT9 208 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 FAM81BQ96LP2 452 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 HAPLN3Q96S86 360 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 KLC2Q9H0B6 622 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 RRN3Q9NYV6 651 aa16.21■□□□□ 0.19
RAB40C-202ENST00000509637 FGFR1OPO95684 399 aaKnown RBP16.2■□□□□ 0.18
RAB40C-202ENST00000509637 CELA2BP08218 269 aaPredicted RBP16.2■□□□□ 0.18
RAB40C-202ENST00000509637 CHRNB2P17787 502 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 SCNN1AP37088 669 aa16.2■□□□□ 0.18
RAB40C-202ENST00000509637 MTIF2P46199 727 aaKnown RBP16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms