RNA–Protein interactions for RNA: ENST00000503078.5

DDX41-202, Transcript of DEAD-box helicase 41, humanhuman

TSL 2

Gene DDX41, Length 2,375 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-202ENST00000503078 SEMA3BQ13214 749 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 NPWQ8N729 165 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 KDM1BQ8NB78 822 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 RNF169Q8NCN4 708 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 FAM156AQ8NDB6 213 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 HDAC11Q96DB2 347 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 ASB9Q96DX5 294 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 DDX18Q9NVP1 670 aaKnown RBP24.84■■□□□ 1.57
DDX41-202ENST00000503078 XPR1Q9UBH6 696 aa24.84■■□□□ 1.57
DDX41-202ENST00000503078 A0A0G2JLL6 359 aaPredicted RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 PYGLP06737 847 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 HSPA1AP0DMV8 641 aaKnown RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 HSPA1BP0DMV9 641 aaKnown RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 AIF1P55008 147 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 CDH17Q12864 832 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 PAOXQ6QHF9 649 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 PRRT2Q7Z6L0 340 aaPredicted RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 SLC41A1Q8IVJ1 513 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 B3GALNT2Q8NCR0 500 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 NTAN1Q96AB6 310 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 MAELQ96JY0 434 aaKnown RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 ZNF560Q96MR9 790 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 HNRNPABQ99729 332 aaKnown RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 LRRC4Q9HBW1 653 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 UTP6Q9NYH9 597 aaKnown RBP24.83■■□□□ 1.57
DDX41-202ENST00000503078 ADA2Q9NZK5 511 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 ACOT9Q9Y305 439 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 PSMC3P17980 439 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 MGAT5BQ3V5L5 792 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 IL23RQ5VWK5 629 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 HFE2Q6ZVN8 426 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 EME1Q96AY2 570 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 C16orf70Q9BSU1 422 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 KIFC1Q9BW19 673 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 ANLNQ9NQW6 1124 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 THEGQ9P2T0 379 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 GINS2Q9Y248 185 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 TSC2P49815 1807 aa24.83■■□□□ 1.57
DDX41-202ENST00000503078 ASB14A6NK59 587 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 TRPC5OSA6NMA1 111 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 TRPA1O75762 1119 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 BEST1O76090 585 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 RECQL4O94761 1208 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 CD4P01730 458 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 INTS6LQ5JSJ4 861 aaKnown RBP24.82■■□□□ 1.56
DDX41-202ENST00000503078 MARCH8Q5T0T0 291 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 DLK2Q6UY11 383 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 SIX6OS1Q8N1H7 587 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 CCNYL1Q8N7R7 359 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 PPTC7Q8NI37 304 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 ATP6V1E2Q96A05 226 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 VAT1Q99536 393 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 UBP1Q9NZI7 540 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 CCDC78A2IDD5 438 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 H0YJX3 145 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 AP3B1O00203 1094 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 CLDN5O00501 218 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 HNRNPRO43390 633 aaKnown RBP24.82■■□□□ 1.56
DDX41-202ENST00000503078 AHSGP02765 367 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 NPR3P17342 541 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 GABRB3P28472 473 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 HCAR3P49019 387 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 PSME3P61289 254 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 SCAPQ12770 1279 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 NAPEPLDQ6IQ20 393 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 ARMCX2Q7L311 632 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 CATSPER4Q7RTX7 472 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 CHERPQ8IWX8 916 aaKnown RBP24.82■■□□□ 1.56
DDX41-202ENST00000503078 KCTD13Q8WZ19 329 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 NXF3Q9H4D5 531 aaKnown RBP24.82■■□□□ 1.56
DDX41-202ENST00000503078 PREBQ9HCU5 417 aa24.82■■□□□ 1.56
DDX41-202ENST00000503078 SUCOQ9UBS9 1254 aaKnown RBP24.82■■□□□ 1.56
DDX41-202ENST00000503078 TMEM233B4DJY2 109 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 SDHDO14521 159 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 NPHS1O60500 1241 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 PSMD8P48556 350 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 GALNT2Q10471 571 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 GRIK4Q16099 956 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 AMIGO2Q86SJ2 522 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 CEP70Q8NHQ1 597 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 WDR6Q9NNW5 1121 aaKnown RBP24.81■■□□□ 1.56
DDX41-202ENST00000503078 TIMMDC1Q9NPL8 285 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 PCDHGA7Q9Y5G6 932 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 SBF1O95248 1867 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 H3BRB1 525 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 I6L893 689 aaPredicted RBP24.81■■□□□ 1.56
DDX41-202ENST00000503078 C8BP07358 591 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 HPCAP84074 193 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 TRIM25Q14258 630 aaKnown RBP24.81■■□□□ 1.56
DDX41-202ENST00000503078 UGP2Q16851 508 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 TSTD2Q5T7W7 516 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 GK5Q6ZS86 529 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 LIMS2Q7Z4I7 341 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 ZSCAN18Q8TBC5 510 aaPredicted RBP24.81■■□□□ 1.56
DDX41-202ENST00000503078 TEKT5Q96M29 485 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 GPR78Q96P69 363 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 TUT1Q9H6E5 874 aaKnown RBP24.81■■□□□ 1.56
DDX41-202ENST00000503078 MRPL40Q9NQ50 206 aaKnown RBP24.81■■□□□ 1.56
DDX41-202ENST00000503078 IRAK4Q9NWZ3 460 aa24.81■■□□□ 1.56
DDX41-202ENST00000503078 AP4S1Q9Y587 144 aa24.81■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 77.8 ms