RNA–Protein interactions for RNA: ENST00000484184.1

DNMT3A-213, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 619 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-213ENST00000484184 ENOX1Q8TC92 643 aaKnown RBP13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 CCNL2Q96S94 520 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 PSMB7Q99436 277 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 TUBGCP2Q9BSJ2 902 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 SLC4A5Q9BY07 1137 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 NDST4Q9H3R1 872 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 STARD5Q9NSY2 213 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 ANO10Q9NW15 660 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 SALL4Q9UJQ4 1053 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 SLC25A13Q9UJS0 675 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 ATXN7L1Q9ULK2 861 aaPredicted RBP13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 HS3ST3A1Q9Y663 406 aa13.05□□□□□ -0.32
DNMT3A-213ENST00000484184 UNC13CQ8NB66 2214 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 K7ERQ8 282 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 KPNA3O00505 521 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 SPINT1O43278 529 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 SART1O43290 800 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 SMAD6O43541 496 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 BNIP3LO60238 219 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 NOBOXO60393 691 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TCEA3O75764 348 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TNFSF15O95150 251 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 PON1P27169 355 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 NFKB2Q00653 900 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TAF5Q15542 800 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 DEFB133Q30KQ1 61 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 ZSCAN23Q3MJ62 389 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TRIM65Q6PJ69 517 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 KYAT3Q6YP21 454 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 CHST14Q8NCH0 376 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TPCN2Q8NHX9 752 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 WDR36Q8NI36 951 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 FAM174AQ8TBP5 190 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 KLF6Q99612 283 aaPredicted RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 HDAC8Q9BY41 377 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 EVA1BQ9NVM1 165 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TMEM63CQ9P1W3 806 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 TBC1D30Q9Y2I9 924 aa13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 SPTBN1Q01082 2364 aaKnown RBP13.04□□□□□ -0.32
DNMT3A-213ENST00000484184 MYO9AB2RTY4 2548 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 TPP1O14773 563 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 AQP9O43315 295 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 SNAP91O60641 907 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 PCDH8O95206 1070 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 ITGA2BP08514 1039 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 YWHAZP63104 245 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 EIF2B5Q13144 721 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 SRSF6Q13247 344 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 AUHQ13825 339 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 STX1AQ16623 288 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 C5orf22Q49AR2 442 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 TCP11X2Q5H9J9 407 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 RABGAP1LQ5R372 815 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 DENND1BQ6P3S1 775 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 C11orf57Q6ZUT1 292 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 ERN2Q76MJ5 926 aaKnown RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 PTAR1Q7Z6K3 402 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 C14orf80Q86SX3 495 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 TMEM110Q86TL2 294 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 PARGQ86W56 976 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 SLC35F3Q8IY50 421 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 ARL14Q8N4G2 192 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 STK32AQ8WU08 396 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 PPP1R9BQ96SB3 815 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 BOCQ9BWV1 1114 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 FAM117AQ9C073 453 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 VPS16Q9H269 839 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 POPDC2Q9HBU9 364 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 ST7Q9NRC1 585 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 FANCLQ9NW38 375 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 TAB2Q9NYJ8 693 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 NCKIPSDQ9NZQ3 722 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 APEX2Q9UBZ4 518 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 VPS28Q9UK41 221 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 DNAJC12Q9UKB3 198 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 PNMA8BQ9ULN7 279 aaPredicted RBP13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 CNTN6Q9UQ52 1028 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 SCN8AQ9UQD0 1980 aa13.03□□□□□ -0.32
DNMT3A-213ENST00000484184 CCDC187A0A096LP49 1063 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 GTPBP10A4D1E9 387 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 E5RJQ4 531 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 NTN3O00634 580 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 RIOK3O14730 519 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 MUSKO15146 869 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 SUV39H1O43463 412 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 ZNF821O75541 412 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 GCATO75600 419 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 LETM1O95202 739 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 PAK4O96013 591 aaPredicted RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 EEF1GP26641 437 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 GGCXP38435 758 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 ACADSBP45954 432 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 TGIF1Q15583 401 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 MIIPQ5JXC2 388 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 CAVIN1Q6NZI2 390 aaKnown RBP13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 FOXR1Q6PIV2 292 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 XKR5Q6UX68 686 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 ENOSF1Q7L5Y1 443 aa13.02□□□□□ -0.33
DNMT3A-213ENST00000484184 EXTL1Q92935 676 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms