RNA–Protein interactions for RNA: ENST00000477757.5

PDLIM1-202, Transcript of PDZ and LIM domain 1, humanhuman

TSL 2

Gene PDLIM1, Length 850 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-202ENST00000477757 C1QBPQ07021 282 aaKnown RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 EIF2B5Q13144 721 aaKnown RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 MTA1Q13330 715 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 C5orf22Q49AR2 442 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 ARSIQ5FYB1 569 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 DENND1BQ6P3S1 775 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 C22orf39Q6P5X5 142 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 C14orf80Q86SX3 495 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 RBFAQ8N0V3 343 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 TBATAQ96M53 351 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 MED15Q96RN5 788 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 KLF6Q99612 283 aaPredicted RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 SYNDIG1Q9H7V2 258 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 WDR70Q9NW82 654 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 ANKMY1Q9P2S6 941 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 SPASTQ9UBP0 616 aa20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 APOBEC3BQ9UH17 382 aaKnown RBP20.68■□□□□ 0.9
PDLIM1-202ENST00000477757 LMO7DNF2Z398 122 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 FPGTO14772 594 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 PMM2O15305 246 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 SMAD6O43541 496 aaKnown RBP20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 AP1G1O43747 822 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 LEFTY1O75610 366 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 ITGB7P26010 798 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 UGT1A5P35504 534 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 GGCXP38435 758 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 CDH4P55283 916 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 CDK17Q00537 523 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 FKBP3Q00688 224 aaKnown RBP20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 SRSF6Q13247 344 aaKnown RBP20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 TGIF1Q15583 401 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 B3GNT8Q7Z7M8 397 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 TMEM110Q86TL2 294 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 DCAF4L2Q8NA75 395 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 FEM1CQ96JP0 617 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 LENG8Q96PV6 779 aaPredicted RBP20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 SLC2A13Q96QE2 648 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 FADS3Q9Y5Q0 445 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 HS3ST4Q9Y661 456 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 WASF2Q9Y6W5 498 aa20.67■□□□□ 0.9
PDLIM1-202ENST00000477757 SYNJ2BP-COX16A0A087WUM0 186 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 GCATO75600 419 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 LIPCP11150 499 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 PFN3P60673 137 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 GCNT1Q02742 428 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 TAF5Q15542 800 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 PRRT3Q5FWE3 981 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 KRBA2Q6ZNG9 492 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 DPY19L3Q6ZPD9 716 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 RAB11FIP2Q7L804 512 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 JAMLQ86YT9 394 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 FBXO39Q8N4B4 442 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 DENND6BQ8NEG7 585 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 TSG101Q99816 390 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 LRRC61Q9BV99 259 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 C1QTNF2Q9BXJ5 285 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 TNKS2Q9H2K2 1166 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 METTL14Q9HCE5 456 aaKnown RBP20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 EPB41L5Q9HCM4 733 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 COX16Q9P0S2 106 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 PCDHGA4Q9Y5G9 962 aa20.66■□□□□ 0.9
PDLIM1-202ENST00000477757 D6RAR5 112 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 RHOCP08134 193 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 RECQLP46063 649 aaPredicted RBP20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 PHACTR4Q8IZ21 702 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 LMO3Q8TAP4 145 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 TCEAL2Q9H3H9 227 aaPredicted RBP20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 PADI4Q9UM07 663 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 CNTN6Q9UQ52 1028 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 RELNP78509 3460 aa20.65■□□□□ 0.9
PDLIM1-202ENST00000477757 USP9YO00507 2555 aaPredicted RBP20.64■□□□□ 0.9
PDLIM1-202ENST00000477757 TMX2-CTNND1H3BSU7 103 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 PPFIA2O75334 1257 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 CNTN5O94779 1100 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 ANXA6P08133 673 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 GLI1P08151 1106 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 L1CAMP32004 1257 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 PRCPP42785 496 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 ADKP55263 362 aaKnown RBP20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 TLE1Q04724 770 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 SGCGQ13326 291 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 PDCLQ13371 301 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 PKP1Q13835 747 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 LINGO4Q6UY18 593 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 PARS2Q7L3T8 475 aaKnown RBP20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 RRAGAQ7L523 313 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 ARHGEF19Q8IW93 802 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 DEFB106AQ8N104 65 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 ASB12Q8WXK4 309 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 STRADBQ9C0K7 418 aa20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 PNMA8BQ9ULN7 279 aaPredicted RBP20.64■□□□□ 0.89
PDLIM1-202ENST00000477757 SCN8AQ9UQD0 1980 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 NVLO15381 856 aaKnown RBP20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 PAGE1O75459 146 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 ZNF821O75541 412 aaPredicted RBP20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 PMS1P54277 932 aaKnown RBP20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 C1orf61Q13536 156 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 TBR1Q16650 682 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 COBLL1Q53SF7 1204 aa20.63■□□□□ 0.89
PDLIM1-202ENST00000477757 ANKRD40Q6AI12 368 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms