RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 ZNF18P17022 549 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 CD97P48960 835 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 CLDN2P57739 230 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 HNRNPKP61978 463 aaKnown RBP eCLIP14.42□□□□□ -0.1
ATG9A-220ENST00000475339 EIF3IQ13347 325 aaKnown RBP14.42□□□□□ -0.1
ATG9A-220ENST00000475339 NR0B2Q15466 257 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 CNGA2Q16280 664 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 DEFB133Q30KQ1 61 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 RFWD3Q6PCD5 774 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 MFN1Q8IWA4 741 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 ARHGAP18Q8N392 663 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 KDM1BQ8NB78 822 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 SHC3Q92529 594 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 SLC12A9Q9BXP2 914 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 FOXP3Q9BZS1 431 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 ZNF768Q9H5H4 540 aaKnown RBP14.42□□□□□ -0.1
ATG9A-220ENST00000475339 SIX2Q9NPC8 291 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 STIM2Q9P246 746 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 LIMA1Q9UHB6 759 aaKnown RBP14.42□□□□□ -0.1
ATG9A-220ENST00000475339 TUBD1Q9UJT1 453 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 CNTN6Q9UQ52 1028 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 PCDHB11Q9Y5F2 797 aa14.42□□□□□ -0.1
ATG9A-220ENST00000475339 PRAMEF33A0A0G2JMD5 474 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 AGRPO00253 132 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 SLC7A4O43246 635 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 PRAMEF10O60809 474 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 CALCAP01258 141 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 VAV1P15498 845 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 UQCRFS1P47985 274 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 TKTL1P51854 596 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 UBXN1Q04323 297 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 PTK2Q05397 1052 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 ADIGQ0VDE8 80 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 CNTN1Q12860 1018 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 ELAVL3Q14576 367 aaKnown RBP14.41□□□□□ -0.1
ATG9A-220ENST00000475339 KLHDC7AQ5VTJ3 777 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 AGBL4Q5VU57 503 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 MMS22LQ6ZRQ5 1243 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 WDR48Q8TAF3 677 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 FIBINQ8TAL6 211 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 SSC4DQ8WTU2 575 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 IFT43Q96FT9 208 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 CCDC3Q9BQI4 270 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 SALL4Q9UJQ4 1053 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 SARDHQ9UL12 918 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 FHOD1Q9Y613 1164 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 CRYBG3Q68DQ2 2970 aa14.41□□□□□ -0.1
ATG9A-220ENST00000475339 GOLGA6L7A0A1B0GV03 622 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 TULP2O00295 520 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 ZBED1O96006 694 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 SRPRAP08240 638 aaKnown RBP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 JMJD7P0C870 316 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 LCP1P13796 627 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 UCHL3P15374 230 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 RGS7P49802 495 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 YWHAGP61981 247 aaKnown RBP eCLIP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 FILIP1LQ4L180 1135 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 MPP7Q5T2T1 576 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 FHL5Q5TD97 284 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 PIK3R6Q5UE93 754 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 SMYD5Q6GMV2 418 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 OR6B2Q6IFH4 312 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 Q6ZSR6 202 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 DTX1Q86Y01 620 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 TICAM1Q8IUC6 712 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 SRRM1Q8IYB3 904 aaKnown RBP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 JPH3Q8WXH2 748 aaPredicted RBP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 RPL10LQ96L21 214 aaKnown RBP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 ZSWIM1Q9BR11 485 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 ULBP1Q9BZM6 244 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 PREBQ9HCU5 417 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 PLCB1Q9NQ66 1216 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 ST7Q9NRC1 585 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 FAM207AQ9NSI2 230 aaPredicted RBP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 FOXJ2Q9P0K8 574 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 SFMBT1Q9UHJ3 866 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 KLF15Q9UIH9 416 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 AJAP1Q9UKB5 411 aaPredicted RBP14.4□□□□□ -0.1
ATG9A-220ENST00000475339 ITIH6Q6UXX5 1313 aa14.4□□□□□ -0.1
ATG9A-220ENST00000475339 A0A1W2PQU0 124 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 GOLGA6L19H0YKK7 550 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 NTN3O00634 580 aaPredicted RBP14.39□□□□□ -0.11
ATG9A-220ENST00000475339 KRT7P08729 469 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 ATP1A3P13637 1013 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 ITIH1P19827 911 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 SLC6A4P31645 630 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 DCTP40126 519 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 MLLT10P55197 1068 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 OXCT1P55809 520 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 TAS2R38P59533 333 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 BPIFB4P59827 614 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 FZD2Q14332 565 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 SYCP1Q15431 976 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 FSCBQ5H9T9 825 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 PITRM1Q5JRX3 1037 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 RAB41Q5JT25 222 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 DENND1BQ6P3S1 775 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 GCNT7Q6ZNI0 430 aa14.39□□□□□ -0.11
ATG9A-220ENST00000475339 C9orf43Q8TAL5 461 aaPredicted RBP14.39□□□□□ -0.11
ATG9A-220ENST00000475339 ZNF606Q8WXB4 792 aa14.39□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms