RNA–Protein interactions for RNA: ENST00000467272.6

UBR4-211, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 891 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-211ENST00000467272 DNAJC28Q9NX36 388 aa12.46□□□□□ -0.41
UBR4-211ENST00000467272 UTP20O75691 2785 aaKnown RBP12.46□□□□□ -0.42
UBR4-211ENST00000467272 AQP9O43315 295 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 HSF2BPO75031 334 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 GCATO75600 419 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 LEFTY1O75610 366 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ADCY5O95622 1261 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ITGA2BP08514 1039 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ADRB3P13945 408 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ZNF18P17022 549 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 BMP6P22004 513 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ITGB7P26010 798 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 GGCXP38435 758 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 RABIFP47224 123 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 CXCR3P49682 368 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 RPS21P63220 83 aaKnown RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 ARSIQ5FYB1 569 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 SMYD5Q6GMV2 418 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 C22orf39Q6P5X5 142 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 RBM44Q6ZP01 1051 aaKnown RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 EFL1Q7Z2Z2 1120 aaKnown RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 BNIPLQ7Z465 357 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ZNF397Q8NF99 534 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 WDR36Q8NI36 951 aaKnown RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 CENPTQ96BT3 561 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 CCDC97Q96F63 343 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 PGAP3Q96FM1 320 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 DHTKD1Q96HY7 919 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 C1orf74Q96LT6 269 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 C2orf49Q9BVC5 232 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 STARD5Q9NSY2 213 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 PIGVQ9NUD9 493 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 IL36AQ9UHA7 158 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 ATXN7L1Q9ULK2 861 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 PCDHGA7Q9Y5G6 932 aa12.45□□□□□ -0.42
UBR4-211ENST00000467272 USP9XQ93008 2570 aaPredicted RBP12.45□□□□□ -0.42
UBR4-211ENST00000467272 CXorf51AA0A1B0GTR3 108 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 SLC28A2O43868 658 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 LETM1O95202 739 aaPredicted RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 PAK4O96013 591 aaPredicted RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 KRT10P13645 584 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 TFE3P19532 575 aaPredicted RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 RBMS1P29558 406 aaKnown RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 NEK3P51956 506 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 KRT83P78385 493 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 EFHC1Q5JVL4 640 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 XKR5Q6UX68 686 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 SLC26A9Q7LBE3 791 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 ZSCAN30Q86W11 494 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 PLPP6Q8IY26 295 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 SLC35F3Q8IY50 421 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 ATP11CQ8NB49 1132 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 LIN37Q96GY3 246 aaPredicted RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 NPY6RQ99463 290 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 GTPBP4Q9BZE4 634 aaKnown RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 CEP44Q9C0F1 390 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 INTS2Q9H0H0 1204 aaKnown RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 TCEAL2Q9H3H9 227 aaPredicted RBP12.44□□□□□ -0.42
UBR4-211ENST00000467272 EVA1BQ9NVM1 165 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 IL17BQ9UHF5 180 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 PCDHGC3Q9UN70 934 aa12.44□□□□□ -0.42
UBR4-211ENST00000467272 PPP1R3GB7ZBB8 358 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 LMO7DNF2Z398 122 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 MED7O43513 233 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 DAB1O75553 588 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 PCDH8O95206 1070 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 L1CAMP32004 1257 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 CETN1Q12798 172 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 DRAP1Q14919 205 aaPredicted RBP12.43□□□□□ -0.42
UBR4-211ENST00000467272 NR0B2Q15466 257 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 DEFB133Q30KQ1 61 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 C6orf132Q5T0Z8 1188 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 LINGO4Q6UY18 593 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 ZNF783Q6ZMS7 281 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 CCDC81Q6ZN84 652 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 FAM183BPQ6ZVS7 135 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 PARS2Q7L3T8 475 aaKnown RBP12.43□□□□□ -0.42
UBR4-211ENST00000467272 PTAR1Q7Z6K3 402 aaPredicted RBP12.43□□□□□ -0.42
UBR4-211ENST00000467272 DENND6BQ8NEG7 585 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 WDR48Q8TAF3 677 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 GRIN3AQ8TCU5 1115 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 FEM1CQ96JP0 617 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 PPP1R13BQ96KQ4 1090 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 CCDC114Q96M63 670 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 CCNL2Q96S94 520 aaPredicted RBP12.43□□□□□ -0.42
UBR4-211ENST00000467272 SRRTQ9BXP5 876 aaKnown RBP12.43□□□□□ -0.42
UBR4-211ENST00000467272 CLPBQ9H078 707 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 MUC3BQ9H195 1237 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 TNKS2Q9H2K2 1166 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 FARP1Q9Y4F1 1045 aaPredicted RBP12.43□□□□□ -0.42
UBR4-211ENST00000467272 UNC79Q9P2D8 2635 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 RP1P56715 2156 aa12.43□□□□□ -0.42
UBR4-211ENST00000467272 CCDC187A0A096LP49 1063 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 ILVBLA1L0T0 632 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 CPED1A4D0V7 1026 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 IGLON5A6NGN9 336 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 H3BM21 787 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 AREL1O15033 823 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 TSPAN6O43657 245 aa12.42□□□□□ -0.42
UBR4-211ENST00000467272 BNIP3LO60238 219 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms