RNA–Protein interactions for RNA: ENST00000456174.6

HDAC9-218, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-218ENST00000456174 ACOX3O15254 700 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 HOXC11O43248 304 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 MED7O43513 233 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 CILPO75339 1184 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 MYO1DO94832 1006 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 H6PDO95479 791 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 STAU1O95793 577 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 ASGR1P07306 291 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 TCF3P15923 654 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 MMP8P22894 467 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 AKAP5P24588 427 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 GABRB3P28472 473 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 MARCKSL1P49006 195 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 ERFP50548 548 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 TXNL4AP83876 142 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 OVGP1Q12889 678 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 PTP4A2Q12974 167 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 STX3Q13277 289 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 ZNF211Q13398 564 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 ORC1Q13415 861 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 ZBTB6Q15916 424 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 GLRA4Q5JXX5 417 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 UBXN11Q5T124 520 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 RARS2Q5T160 578 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 XKR5Q6UX68 686 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 SYDE1Q6ZW31 735 aaPredicted RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 CPNE8Q86YQ8 564 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 SLC4A11Q8NBS3 891 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 BEST2Q8NFU1 509 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 TANKQ92844 425 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 YME1L1Q96TA2 773 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 TSSK1BQ9BXA7 367 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 ZNF518BQ9C0D4 1074 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 CLPBQ9H078 707 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 RPF2Q9H7B2 306 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 MRPL47Q9HD33 250 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 THG1LQ9NWX6 298 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 KCNK4Q9NYG8 393 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 CNTN3Q9P232 1028 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 HMGXB4Q9UGU5 601 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 NOSIPQ9Y314 301 aaKnown RBP7.76□□□□□ -1.17
HDAC9-218ENST00000456174 GPSM3Q9Y4H4 160 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 CORINQ9Y5Q5 1042 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 CDY2AQ9Y6F7 541 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 IKBKGQ9Y6K9 419 aa7.76□□□□□ -1.17
HDAC9-218ENST00000456174 A6NL46 340 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SNTNA6NMZ2 147 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 H0YJX3 145 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 NUAK1O60285 661 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SNAP91O60641 907 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 GMNNO75496 209 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TSPAN9O75954 239 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 ATE1O95260 518 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 CALB1P05937 261 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 IVDP26440 423 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 DCKP27707 260 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 CDH5P33151 784 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-218ENST00000456174 NDST2P52849 883 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 MAMLD1Q13495 774 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SIX1Q15475 284 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-218ENST00000456174 KCNA10Q16322 511 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TJAP1Q5JTD0 557 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 RABGAP1LQ5R372 815 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 PLEKHA7Q6IQ23 1121 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 ANKRD26P1Q6NSI1 321 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 LYSMD3Q7Z3D4 306 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 IGFN1Q86VF2 1251 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 CHSY1Q86X52 802 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 WDTC1Q8N5D0 677 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SLC15A4Q8N697 577 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 CAPSLQ8WWF8 208 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 C18orf25Q96B23 403 aaPredicted RBP7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TMEM176AQ96HP8 235 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TWNKQ96RR1 684 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 UQCC2Q9BRT2 126 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 CCDC106Q9BWC9 280 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 ELOVL4Q9GZR5 314 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 LRRC19Q9H756 370 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 MANSC1Q9H8J5 431 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 C12orf4Q9NQ89 552 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 RNF19AQ9NV58 838 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 PARVAQ9NVD7 372 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 KLK14Q9P0G3 267 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 ARMCX1Q9P291 453 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SRRDQ9UH36 339 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 DAPK2Q9UIK4 370 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 CNOT11Q9UKZ1 510 aaKnown RBP7.75□□□□□ -1.17
HDAC9-218ENST00000456174 IPPQ9Y573 584 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TRPV2Q9Y5S1 764 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 THSD7BQ9C0I4 1608 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 A0A1B0GTW7 788 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SMIM28A0A1B0GU29 152 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 GRXCR2A6NFK2 248 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 J3QRK9 145 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 PPEF2O14830 753 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TM9SF1O15321 606 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TLR3O15455 904 aaKnown RBP7.75□□□□□ -1.17
HDAC9-218ENST00000456174 SNX2O60749 519 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 JRKO75564 520 aa7.75□□□□□ -1.17
HDAC9-218ENST00000456174 TPTEP56180 551 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms