RNA–Protein interactions for RNA: ENST00000425244.6

CUX1-205, Transcript of cut like homeobox 1, humanhuman

TSL 2 BASIC

Gene CUX1, Length 2,776 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-205ENST00000425244 TBCCQ15814 346 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SLC5A9Q2M3M2 681 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 TBC1D25Q3MII6 688 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 RALGPS1Q5JS13 557 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 CD300LGQ6UXG3 332 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 DNAJC14Q6Y2X3 702 aaPredicted RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 OTOP3Q7RTS5 596 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 TRIM74Q86UV6 250 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 TRIM73Q86UV7 250 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 KCNMB4Q86W47 210 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 TMEM173Q86WV6 379 aaPredicted RBP10.85□□□□□ -0.67
CUX1-205ENST00000425244 NTAN1Q96AB6 310 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 GBA3Q9H227 469 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 CNGB3Q9NQW8 809 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 SOX13Q9UN79 622 aa10.85□□□□□ -0.67
CUX1-205ENST00000425244 ZCWPW2A0A1B0GU75 182 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 E9PBE3 544 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 KLHL41O60662 606 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 ZMPSTE24O75844 475 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 PDE5AO76074 875 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 USP1O94782 785 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 CSPG5O95196 566 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 ALDH2P05091 517 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 AOC1P19801 751 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 COPAP53621 1224 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 YWHAHQ04917 246 aaPredicted RBP10.84□□□□□ -0.67
CUX1-205ENST00000425244 ZRSR2Q15696 482 aaKnown RBP10.84□□□□□ -0.67
CUX1-205ENST00000425244 DBN1Q16643 649 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 INSCQ1MX18 579 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 TRMT5Q32P41 509 aaKnown RBP10.84□□□□□ -0.67
CUX1-205ENST00000425244 RABGAP1LQ5R372 815 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 FAM171A1Q5VUB5 890 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 ITPRIPL1Q6GPH6 555 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 NET1Q7Z628 596 aaPredicted RBP10.84□□□□□ -0.67
CUX1-205ENST00000425244 UCMAQ8WVF2 138 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 SLC9A7Q96T83 725 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 SIKE1Q9BRV8 207 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 ZBBXA8MT70 800 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 KLHL2O95198 593 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 BDNFP23560 247 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 NMBRP28336 390 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 AVPR1AP37288 418 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 DEFB103AP81534 67 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 DSC1Q08554 894 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 SEMA3BQ13214 749 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 PDPK2PQ6A1A2 396 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 NAPRTQ6XQN6 538 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 TAC4Q86UU9 113 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 TMEM86AQ8N2M4 240 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 EFCAB3Q8N7B9 438 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 ZNF781Q8N8C0 355 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 HIPK4Q8NE63 616 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 OR10T2Q8NGX3 314 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 MYLPFQ96A32 169 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 CASS4Q9NQ75 786 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 ANGPTL2Q9UKU9 493 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 G3BP2Q9UN86 482 aaKnown RBP10.84□□□□□ -0.67
CUX1-205ENST00000425244 UNC80Q8N2C7 3258 aa10.84□□□□□ -0.67
CUX1-205ENST00000425244 NCAM2O15394 837 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 PHGDHO43175 533 aaKnown RBP10.83□□□□□ -0.68
CUX1-205ENST00000425244 DCXO43602 365 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 C2P06681 752 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GLRBP48167 497 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 KLC1Q07866 573 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SCAPQ12770 1279 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 CCDC153Q494R4 210 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 KDELC2Q7Z4H8 507 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 TMEM135Q86UB9 458 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 NPAS4Q8IUM7 802 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 PHTF2Q8N3S3 785 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SPATA22Q8NHS9 363 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 VPS39Q96JC1 886 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 UROC1Q96N76 676 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 RTP3Q9BQQ7 232 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GPR62Q9BZJ7 368 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 UNKQ9C0B0 810 aaKnown RBP10.83□□□□□ -0.68
CUX1-205ENST00000425244 TMLHEQ9NVH6 421 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GOLGA8QA0A0J9YX86 632 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GOLGA8OA6NCC3 632 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GOLGA8NF8WBI6 632 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 NEMP1O14524 444 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SORBS2O94875 1100 aaKnown RBP10.83□□□□□ -0.68
CUX1-205ENST00000425244 TIMP1P01033 207 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 CXCL10P02778 98 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 ATP5BP06576 529 aaKnown RBP10.83□□□□□ -0.68
CUX1-205ENST00000425244 ANPEPP15144 967 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SYN1P17600 705 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 PCSK1P29120 753 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SERPINB6P35237 376 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GCKP35557 465 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 SLC11A1P49279 550 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 ACTR3P61158 418 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 GALNT2Q10471 571 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 CUL3Q13618 768 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 PRPSAP1Q14558 356 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 PDCD2Q16342 344 aaPredicted RBP10.83□□□□□ -0.68
CUX1-205ENST00000425244 TMEM154Q6P9G4 183 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 ARHGAP36Q6ZRI8 547 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 LRRTM3Q86VH5 581 aa10.83□□□□□ -0.68
CUX1-205ENST00000425244 IPMKQ8NFU5 416 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms