RNA–Protein interactions for RNA: ENST00000424270.6

SDCBP-203, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SDCBP, Length 1,277 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-203ENST00000424270 COX6B1P14854 86 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 ITGB7P26010 798 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 ALDH4A1P30038 563 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 PRPHP41219 470 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 TAS2R38P59533 333 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 RPS24P62847 133 aaKnown RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 SULT2A1Q06520 285 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 EIF2B5Q13144 721 aaKnown RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 ANKRD1Q15327 319 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 IL17AQ16552 155 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 TMEM119Q4V9L6 283 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 HYIQ5T013 277 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 PIP5KL1Q5T9C9 394 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 KIAA1161Q6NSJ0 714 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 Q6ZVU0 165 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 SPRED1Q7Z699 444 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 UNC45BQ8IWX7 931 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 APCDD1Q8J025 514 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 GLIS1Q8NBF1 620 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 AGBL5Q8NDL9 886 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 GRIN3AQ8TCU5 1115 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 EDEM1Q92611 657 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 ELMO3Q96BJ8 720 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 PPP1R16AQ96I34 528 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 FEM1CQ96JP0 617 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 CCDC74BQ96LY2 380 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 SLC25A23Q9BV35 468 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 DDA1Q9BW61 102 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 TWSG1Q9GZX9 223 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 KIAA1586Q9HCI6 787 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 PNPLA8Q9NP80 782 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 MRPL40Q9NQ50 206 aaKnown RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 LRIT1Q9P2V4 623 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 INTS6Q9UL03 887 aaKnown RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 PCDHGA3Q9Y5H0 932 aa6.47□□□□□ -1.37
SDCBP-203ENST00000424270 MRPS18BQ9Y676 258 aaKnown RBP6.47□□□□□ -1.37
SDCBP-203ENST00000424270 PDZD2O15018 2839 aa6.46□□□□□ -1.37
SDCBP-203ENST00000424270 FRMD3A2A2Y4 597 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 RHPN2P1A8MT19 583 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 HHLA1C9JL84 531 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 HGSO14964 777 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CLIC2O15247 247 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 ALOX15BO15296 676 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 RAD51BO15315 384 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 SPINT1O43278 529 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 LRRTM2O43300 516 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 ACSL4O60488 711 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 DNAJB5O75953 348 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CPNE6O95741 557 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 MOCS2O96007 188 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 PDGFAP04085 211 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CD99P14209 185 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CD1EP15812 388 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 PDGFRAP16234 1089 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 GLB1P16278 677 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 GAP43P17677 238 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 MPSTP25325 297 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 DLSTP36957 453 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 TKTL1P51854 596 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 PMS2P54278 862 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 RAB15P59190 212 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 NNTQ13423 1086 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 SNRNP35Q16560 246 aaKnown RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 FSCBQ5H9T9 825 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 ANKS6Q68DC2 871 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 SPNS3Q6ZMD2 512 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 STXBP4Q6ZWJ1 553 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 ERN2Q76MJ5 926 aaKnown RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 ZNF438Q7Z4V0 828 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CDH24Q86UP0 819 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 FAM184AQ8NB25 1140 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 LARP4BQ92615 738 aaKnown RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 RAD54LQ92698 747 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 FIZ1Q96SL8 496 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 SPENQ96T58 3664 aaKnown RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CTRCQ99895 268 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 CLPBQ9H078 707 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 TRIT1Q9H3H1 467 aaKnown RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 SLTMQ9NWH9 1034 aaKnown RBP eCLIP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 RCOR3Q9P2K3 495 aaPredicted RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 HMGXB4Q9UGU5 601 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 ZFR2Q9UPR6 939 aaKnown RBP6.46□□□□□ -1.38
SDCBP-203ENST00000424270 NAALADL1Q9UQQ1 740 aa6.46□□□□□ -1.38
SDCBP-203ENST00000424270 PIPSLA2A3N6 862 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 BHMG1C9JSJ3 638 aaPredicted RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 MCF2LO15068 1137 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 DPM1O60762 260 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 FAM155BO75949 473 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 SORBS2O94875 1100 aaKnown RBP6.45□□□□□ -1.38
SDCBP-203ENST00000424270 RASGRP1O95267 797 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 ZBED1O96006 694 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 PRNPP04156 253 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CD58P19256 250 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 HTR1BP28222 390 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CASP14P31944 242 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CHRNA3P32297 505 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 PTGER4P35408 488 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 CYP2J2P51589 502 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 NEK3P51956 506 aa6.45□□□□□ -1.38
SDCBP-203ENST00000424270 HDAC4P56524 1084 aa6.45□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms